Evidence map›Paper›PMID 27446173›Full record

ArticleFrontiers in plant science2016

Genome-Wide Association Study Reveals a New QTL for Salinity Tolerance in Barley (Hordeum vulgare L.).

Yun Fan, Gaofeng Zhou, Sergey Shabala, Zhong-Hua Chen, Shengguan Cai, Chengdao Li, Meixue Zhou

Abstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The potential functions ofFrontiers in plant science · 2025
    Article
  7. Review
  8. Article
  9. HvNCX, a prime candidate gene for the novel qualitative locus qS7.1 associated with salinity tolerance in barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Genome-wide association study reveals a genomic region on 5AL for salinity tolerance in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yun FanSchool of Land and Food and Tasmanian Institute for Agriculture, University of Tasmania, Kings Meadows, TAS Australia.
Gaofeng ZhouWestern Australian State Agricultural Biotechnology Centre, Murdoch University, Murdoch, WA Australia.
Sergey ShabalaSchool of Land and Food and Tasmanian Institute for Agriculture, University of Tasmania, Kings Meadows, TAS Australia.
Zhong-Hua ChenSchool of Science and Health, Western Sydney University, Penrith, NSW Australia.
Shengguan CaiSchool of Science and Health, Western Sydney University, Penrith, NSW Australia.
Chengdao LiWestern Australian State Agricultural Biotechnology Centre, Murdoch University, Murdoch, WA Australia.
Meixue ZhouSchool of Land and Food and Tasmanian Institute for Agriculture, University of Tasmania, Kings Meadows, TAS Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salinity stress is one of the most severe abiotic stresses that affect agricultural production. Genome wide association study (GWAS) has been widely used to detect genetic variations in extensive natural accessions with more recombination and higher resolution. In this study, 206 barley accessions collected worldwide were genotyped with 408 Diversity Arrays Technology (DArT) markers and evaluated for salinity stress tolerance using salinity tolerance score - a reliable trait developed in our previous work. GWAS for salinity tolerance had been conducted through a general linkage model and a mixed linkage model based on population structure and kinship. A total of 24 significant marker-trait associations were identified. A QTL on 4H with the nearest marker of bPb-9668 was consistently detected in all different methods. This QTL has not been reported before and is worth to be further confirmed with bi-parental populations.

Indexed as

barleyevaluation methodsgenome wide association studyQTL mappingsalinity tolerance

Identifiers

PMID27446173
PMCPMC4923249

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.