Evidence map›Paper›PMID 27446131›Full record

ArticleFrontiers in plant science2016

Pathogenesis-Related Protein 1b1 (PR1b1) Is a Major Tomato Fruit Protein Responsive to Chilling Temperature and Upregulated in High Polyamine Transgenic Genotypes.

Ravinder K Goyal, Tahira Fatima, Muhamet Topuz, Anne Bernadec, Richard Sicher, Avtar K Handa, Autar K Mattoo

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Pooled it
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  12. Enhanced Abiotic Stress Tolerance ofPlants (Basel, Switzerland) · 2021
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  15. Response of transgenic tobacco overexpressing thePhysiology and molecular biology of plants : an international journal of functional plant biology · 2020
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  20. Comparative Analyses ofThe plant pathology journal · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Ravinder K GoyalSustainable Agricultural Systems Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville MD, USA.
Tahira FatimaSustainable Agricultural Systems Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville MD, USA.
Muhamet TopuzSustainable Agricultural Systems Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville MD, USA.
Anne BernadecSustainable Agricultural Systems Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville MD, USA.
Richard SicherCrop Systems and Global Change Laboratory, The Henry A. Wallace Beltsville Agricultural Research Center, Agricultural Research Service - United States Department of Agriculture, Beltsville MD, USA.
Avtar K HandaDepartment of Horticulture and Landscape Architecture, Purdue University, W. Lafayette IN, USA.
Autar K MattooSustainable Agricultural Systems Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville MD, USA.
United States Department of Agriculture · USAgricultural Research Service · USPurdue University West Lafayette · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants execute an array of mechanisms in response to stress which include upregulation of defense-related proteins and changes in specific metabolites. Polyamines - putrescine (Put), spermidine (Spd), and spermine (Spm) - are metabolites commonly found associated with abiotic stresses such as chilling stress. We have generated two transgenic tomato lines (556HO and 579HO) that express yeast S-adenosylmethionine decarboxylase and specifically accumulate Spd and Spm in fruits in comparison to fruits from control (556AZ) plants (Mehta et al., 2002). Tomato fruits undergo chilling injury at temperatures below 13°C. The high Spd and Spm tomato together with the control azygous line were utilized to address role(s) of polyamines in chilling-injury signaling. Exposure to chilling temperature (2°C) led to several-fold increase in the Put content in all the lines. Upon re-warming of the fruits at 20°C, the levels of Spd and Spm increased further in the fruit of the two transgenic lines, the higher levels remaining stable for 15 days after re-warming as compared to the fruit from the control line. Profiling their steady state proteins before and after re-warming highlighted a protein of ∼14 kD. Using proteomics approach, protein sequencing and immunoblotting, the ∼14-kD protein was identified as the pathogenesis related protein 1b1 (PR1b1). The PR1b1 protein accumulated transiently in the control fruit whose level was barely detectable at d 15 post-warming while in the fruit from both the 556HO and 579HO transgenic lines PR1b1 abundance increased and remained stable till d 15 post warming. PR1b1 gene transcripts were found low in the control fruit with a visible accumulation only on d 15 post warming; however, in both the transgenic lines it accumulated and increased soon after rewarming being several-fold higher on day 2 while in 556HO line this increase continued until d 6 than the control fruit. The chilling-induced increase in PR1b1 protein seems independent of ethylene and methyl jasmonate signaling but may be linked to salicylic acid. We propose that polyamine-mediated sustained accumulation of PR1b1 protein in post-warmed chilled tomato fruit is a pre-emptive cold stress response and possibly a defense response mechanism related to Cold Stress-Induced Disease Resistance (SIDR) phenomenon.

Indexed as

1-MCPcold responsive genesethylenegenetic engineeringlow temperature responsemethyl jasmonatePR proteinsSolanum lycopersicum

Identifiers

PMID27446131
PMCPMC4916175
OpenAlexW2474426304

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.