Evidence map›Paper›PMID 27445649›Full record

ArticleGenomics & informatics2016

Genome-Wide Association Study of Bone Mineral Density in Korean Men.

Ye Seul Bae, Sun-Wha Im, Mi So Kang, Jin Hee Kim, Soon Hang Lee, Be Long Cho, Jin Ho Park, You-Seon Nam, Ho-Young Son, San Deok Yang and 4 more

Open access · diamondAbstract read
In one paragraph

Article in Genomics & informatics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Obesity and Bone Health Revisited: A Mendelian Randomization Study for Koreans.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Ye Seul BaeDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
Sun-Wha ImNeuro-Immune Information Storage Network Research Center, Seoul National University College of Medicine, Seoul 03080, Korea.
Mi So KangDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
Jin Hee KimDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
Soon Hang LeeDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
Be Long ChoDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
Jin Ho ParkDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
You-Seon NamDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
Ho-Young SonDepartment of Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul 03080, Korea.
San Deok YangDepartment of Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul 03080, Korea.
Joohon SungDepartment of Epidemiology, Seoul National University School of Public Health/Institute of Health and Environment, Seoul National University, Seoul 08826, Korea.
Kwang Ho OhDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
Jae Moon YunDepartment of Family Medicine, Seoul National University Hospital, Seoul National University College of Medicine, Seoul 03080, Korea.
Jong Il KimDepartment of Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul 03080, Korea.
Seoul National University Hospital · KRSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Osteoporosis is a medical condition of global concern, with increasing incidence in both sexes. Bone mineral density (BMD), a highly heritable trait, has been proven a useful diagnostic factor in predicting fracture. Because medical information is lacking about male osteoporotic genetics, we conducted a genome-wide association study of BMD in Korean men. With 1,176 participants, we analyzed 4,414,664 single nucleotide polymorphisms (SNPs) after genomic imputation, and identified five SNPs and three loci correlated with bone density and strength. Multivariate linear regression models were applied to adjust for age and body mass index interference. Rs17124500 (p = 6.42 × 10(-7)), rs34594869 (p = 6.53 × 10(-7)) and rs17124504 (p = 6.53 × 10(-7)) in 14q31.3 and rs140155614 (p = 8.64 × 10(-7)) in 15q25.1 were significantly associated with lumbar spine BMD (LS-BMD), while rs111822233 (p = 6.35 × 10(-7)) was linked with the femur total BMD (FT-BMD). Additionally, we analyzed the relationship between BMD and five genes previously identified in Korean men. Rs61382873 (p = 0.0009) in LRP5, rs9567003 (p = 0.0033) in TNFSF11 and rs9935828 (p = 0.0248) in FOXL1 were observed for LS-BMD. Furthermore, rs33997547 (p = 0.0057) in ZBTB and rs1664496 (p = 0.0012) in MEF2C were found to influence FT-BMD and rs61769193 (p = 0.0114) in ZBTB to influence femur neck BMD. We identified five SNPs and three genomic regions, associated with BMD. The significance of our results lies in the discovery of new loci, while also affirming a previously significant locus, as potential osteoporotic factors in the Korean male population.

Indexed as

bone densitygenome-wide association studyKoreansmensingle nucleotide polymorphisms

Identifiers

PMID27445649
PMCPMC4951402
OpenAlexW2465540709

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.