Evidence map›Paper›PMID 27445331›Full record

ArticleThe Journal of biological chemistry2016

Identification of a Membrane-bound Prepore Species Clarifies the Lytic Mechanism of Actinoporins.

Koldo Morante, Augusto Bellomio, David Gil-Cartón, Lorena Redondo-Morata, Jesús Sot, Simon Scheuring, Mikel Valle, Juan Manuel González-Mañas, Kouhei Tsumoto, Jose M M Caaveiro

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Sea Anemones, Actinoporins, and Cholesterol.International journal of molecular sciences · 2022
    Review
  7. Challenges and approaches to studying pore-forming proteins.Biochemical Society transactions · 2021
    Review
  8. Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Identification of a pore-forming protein from sea anemoneThe journal of venomous animals and toxins including tropical diseases · 2019
    Article
  14. Review
  15. Haemolytic actinoporins interact with carbohydrates using their lipid-binding module.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Koldo MoranteFrom the Department of Bioengineering, Graduate School of Engineering, University of Tokyo, Bunkyo-ku, Tokyo 113-8656, Japan.ORCID 0000-0002-9877-9168
Augusto Bellomiothe Department of Biochemistry and Molecular Biology and.
David Gil-Cartónthe Structural Biology Unit, Center for Cooperative Research in Biosciences, CICbiogune, 48160 Derio, Spain.
Lorena Redondo-Moratathe U1006 INSERM, Aix-Marseille Université, Parc Scientifique et Technologique de Luminy, 163 Avenue de Luminy, 13009 Marseille, France, and.
Jesús Sotthe Department of Biochemistry and Molecular Biology and.
Simon Scheuringthe U1006 INSERM, Aix-Marseille Université, Parc Scientifique et Technologique de Luminy, 163 Avenue de Luminy, 13009 Marseille, France, and.
Mikel Vallethe Structural Biology Unit, Center for Cooperative Research in Biosciences, CICbiogune, 48160 Derio, Spain.
Juan Manuel González-Mañasthe Department of Biochemistry and Molecular Biology and.
Kouhei TsumotoFrom the Department of Bioengineering, Graduate School of Engineering, University of Tokyo, Bunkyo-ku, Tokyo 113-8656, Japan, tsumoto@bioeng.t.u-tokyo.ac.jp.
Jose M M CaaveiroFrom the Department of Bioengineering, Graduate School of Engineering, University of Tokyo, Bunkyo-ku, Tokyo 113-8656, Japan, jose@bioeng.t.u-tokyo.ac.jp.ORCID 0000-0001-5568-2369

Funding

European Research Council 310080
6 · The paper itself

Abstract

Pore-forming toxins (PFTs) are cytolytic proteins belonging to the molecular warfare apparatus of living organisms. The assembly of the functional transmembrane pore requires several intermediate steps ranging from a water-soluble monomeric species to the multimeric ensemble inserted in the cell membrane. The non-lytic oligomeric intermediate known as prepore plays an essential role in the mechanism of insertion of the class of β-PFTs. However, in the class of α-PFTs, like the actinoporins produced by sea anemones, evidence of membrane-bound prepores is still lacking. We have employed single-particle cryo-electron microscopy (cryo-EM) and atomic force microscopy to identify, for the first time, a prepore species of the actinoporin fragaceatoxin C bound to lipid vesicles. The size of the prepore coincides with that of the functional pore, except for the transmembrane region, which is absent in the prepore. Biochemical assays indicated that, in the prepore species, the N terminus is not inserted in the bilayer but is exposed to the aqueous solution. Our study reveals the structure of the prepore in actinoporins and highlights the role of structural intermediates for the formation of cytolytic pores by an α-PFT.

Indexed as

Membranes, ArtificialAnimalsCnidarian VenomsCryoelectron MicroscopyMicroscopy, Atomic ForcePore Forming Cytotoxic ProteinsSea AnemonesCnidarian Venomsfragaceatoxin CMembranes, ArtificialPore Forming Cytotoxic Proteinsatomic force microscopy (AFM)cryo-electron microscopycytolysinlipid-protein interactionlipid vesicleoligomerizationpore forming proteinprotein structure

Identifiers

PMID27445331
PMCPMC5016661

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.