ArticleScientific reports2016
The mitochondrial genome map of Nelumbo nucifera reveals ancient evolutionary features.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
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41 citing papers in PubMed.
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- Complete mitochondrial genome assembly and structural feature analysis of Thinopyrum elongatum (Poaceae).Planta · 2025Article
- Assembly and comparative analysis of four complete mitochondrial genomes of Pulsatilla species.BMC plant biology · 2025Article
- Plastome and transcriptome analysis reveals a degenerated photosynthesis-related pathway in the mycoheterotrophic vanilloid orchid Cyrtosia lindleyana.BMC plant biology · 2025Article
- Characterize the Complete Mitogenome ofEcology and evolution · 2025Article
- Comprehensive analysis of the multi-rings mitochondrial genome of Populus tomentosa.BMC genomics · 2025Article
- Unraveling the mitochondrial genome ofFrontiers in plant science · 2025Article
- Organelle genomes reveal adaptive evolution and phylogenetic position of the endangeredFrontiers in plant science · 2025Article
- Assembly and comparative analysis of the mitochondrial genome ofFrontiers in plant science · 2025Article
- Complete mitochondrial genome ofFrontiers in genetics · 2025Article
- The first complete mitochondrial genome assembly and comparative analysis of the fern Blechnaceae family:Frontiers in plant science · 2025Article
- The organelle genomes of the endangered seagrassFrontiers in plant science · 2025Article
- Deciphering the multi- partite mitochondrial genome of Crataegus pinnatifida: insights into the evolution and genetics of cultivated Hawthorn.BMC plant biology · 2024Article
- Assembly and comparative analysis of the complete mitochondrial genome of Fritillaria ussuriensis Maxim. (Liliales: Liliaceae), an endangered medicinal plant.BMC genomics · 2024Article
- Characterization of the CMS genetic regulation through comparative complete mitochondrial genome sequencing in Nicotiana tabacum.The plant genome · 2024Article
- Characterization of the Complete Mitochondrial Genome of Wintersweet (Life (Basel, Switzerland) · 2024Article
- Mitochondrial genome insights into the spatio-temporal distribution and genetic diversity ofFrontiers in plant science · 2024Article
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7 authors.
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Abstract
Nelumbo nucifera is an evolutionary relic from the Late Cretaceous period. Sequencing the N. nucifera mitochondrial genome is important for elucidating the evolutionary characteristics of basal eudicots. Here, the N. nucifera mitochondrial genome was sequenced using single molecule real-time sequencing technology (SMRT), and the mitochondrial genome map was constructed after de novo assembly and annotation. The results showed that the 524,797-bp N. nucifera mitochondrial genome has a total of 63 genes, including 40 protein-coding genes, three rRNA genes and 20 tRNA genes. Fifteen collinear gene clusters were conserved across different plant species. Approximately 700 RNA editing sites in the protein-coding genes were identified. Positively selected genes were identified with selection pressure analysis. Nineteen chloroplast-derived fragments were identified, and seven tRNAs were derived from the chloroplast. These results suggest that the N. nucifera mitochondrial genome retains evolutionarily conserved characteristics, including ancient gene content and gene clusters, high levels of RNA editing, and low levels of chloroplast-derived fragment insertions. As the first publicly available basal eudicot mitochondrial genome, the N. nucifera mitochondrial genome facilitates further analysis of the characteristics of basal eudicots and provides clues of the evolutionary trajectory from basal angiosperms to advanced eudicots.
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