Evidence map›Paper›PMID 27442502›Full record

ArticlePloS one2016

Matrix-assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) Can Precisely Discriminate the Lineages of Listeria monocytogenes and Species of Listeria.

Teruyo Ojima-Kato, Naomi Yamamoto, Hajime Takahashi, Hiroto Tamura

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Identification and Differentiation of Non-HemolyticMolecules (Basel, Switzerland) · 2025
    Article
  2. Proteotyping ofMicroorganisms · 2023
    Article
  3. Article
  4. Food science & nutrition · 2022
    Review
  5. Isolation ofBiology · 2022
    Article
  6. Differentiation ofMicroorganisms · 2022
    Article
  7. Proteomic Characterization of Antibiotic Resistance inInternational journal of molecular sciences · 2021
    Article
  8. Article
  9. Differentiation ofEuropean journal of microbiology & immunology · 2019
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Teruyo Ojima-KatoKnowledge Hub Aichi, Aichi Science and Technology Foundation, Yakusa, Toyota, Aichi 470-0356, Japan.ORCID http://orcid.org/0000-0001-5290-5176
Naomi YamamotoSchool of Agriculture, Meijo University, Shiogamaguchi, Tenpaku-ku, Nagoya, Aichi 468-0073, Japan.
Hajime TakahashiDepartment of Food Science and Technology, Faculty of Marine Science, Tokyo University of Marine Science and Technology, 4-5-7, Konan, Minato-ku, Tokyo, 108-8477 Japan.
Hiroto TamuraKnowledge Hub Aichi, Aichi Science and Technology Foundation, Yakusa, Toyota, Aichi 470-0356, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic lineages of Listeria monocytogenes and other species of the genus Listeria are correlated with pathogenesis in humans. Although matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) has become a prevailing tool for rapid and reliable microbial identification, the precise discrimination of Listeria species and lineages remains a crucial issue in clinical settings and for food safety. In this study, we constructed an accurate and reliable MS database to discriminate the lineages of L. monocytogenes and the species of Listeria (L. monocytogenes, L. innocua, L. welshimeri, L. seeligeri, L. ivanovii, L. grayi, and L. rocourtiae) based on the S10-spc-alpha operon gene encoded ribosomal protein mass spectrum (S10-GERMS) proteotyping method, which relies on both genetic information (genomics) and observed MS peaks in MALDI-TOF MS (proteomics). The specific set of eight biomarkers (ribosomal proteins L24, L6, L18, L15, S11, S9, L31 type B, and S16) yielded characteristic MS patterns for the lineages of L. monocytogenes and the different species of Listeria, and led to the construction of a MS database that was successful in discriminating between these organisms in MALDI-TOF MS fingerprinting analysis followed by advanced proteotyping software Strain Solution analysis. We also confirmed the constructed database on the proteotyping software Strain Solution by using 23 Listeria strains collected from natural sources.

Indexed as

Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationComputational BiologyDatabases, GeneticDNA FingerprintingListeriaListeria monocytogenesSoftware

Identifiers

PMID27442502
PMCPMC4956195

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.