Evidence map›Paper›PMID 27442435›Full record

ArticlePloS one2016

Disruption of Transporters Affiliated with Enantio-Pyochelin Biosynthesis Gene Cluster of Pseudomonas protegens Pf-5 Has Pleiotropic Effects.

Chee Kent Lim, Anahit Penesyan, Karl A Hassan, Joyce E Loper, Ian T Paulsen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Antibiotics (Basel, Switzerland) · 2022
    Review
  4. Frontiers in microbiology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Chee Kent LimDepartment of Chemistry and Biomolecular Sciences, Faculty of Science and Engineering, Macquarie University, Sydney, New South Wales, Australia.
Anahit PenesyanDepartment of Chemistry and Biomolecular Sciences, Faculty of Science and Engineering, Macquarie University, Sydney, New South Wales, Australia.
Karl A HassanDepartment of Chemistry and Biomolecular Sciences, Faculty of Science and Engineering, Macquarie University, Sydney, New South Wales, Australia.
Joyce E LoperUSDA-ARS Horticultural Crops Research Laboratory and Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America.
Ian T PaulsenDepartment of Chemistry and Biomolecular Sciences, Faculty of Science and Engineering, Macquarie University, Sydney, New South Wales, Australia.
Macquarie University · AUHorticultural Crops Research Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pseudomonas protegens Pf-5 (formerly Pseudomonas fluorescens) is a biocontrol bacterium that produces the siderophore enantio-pyochelin under conditions of iron starvation in a process that is often accompanied by the secretion of its biosynthesis intermediates, salicylic acid and dihydroaeruginoic acid. In this study, we investigated whether several transporters that are encoded by genes within or adjacent to the enantio-pyochelin biosynthetic cluster, serve as efflux systems for enantio-pyochelin and/or its intermediates. In addition, we determined whether these transporters have broad substrates range specificity using a Phenotype Microarray system. Intriguingly, knockouts of the pchH and fetF transporter genes resulted in mutant strains that secrete higher levels of enantio-pyochelin as well as its intermediates salicylic acid and dihydroaeruginoic acid. Analyses of these mutants did not indicate significant change in transcription of biosynthetic genes involved in enantio-pyochelin production. In contrast, the deletion mutant of PFL_3504 resulted in reduced transcription of the biosynthetic genes as well as decreased dihydroaeruginoic acid concentrations in the culture supernatant, which could either point to regulation of gene expression by the transporter or its role in dihydroaeruginoic acid transport. Disruption of each of the transporters resulted in altered stress and/or chemical resistance profile of Pf-5, which may reflect that these transporters could have specificity for rather a broad range of substrates.

Indexed as

Multigene FamilyAnti-Bacterial AgentsBacterial ProteinsComputational BiologyGene Expression ProfilingGene Expression Regulation, BacterialGene Knockout TechniquesMembrane Transport ProteinsPseudomonasSalicylic AcidThiazolesTranscription, Genetic2'-(2-hydroxyphenyl)-2'-thiazoline-4'-carboxylic acidAnti-Bacterial AgentsBacterial ProteinsMembrane Transport ProteinsSalicylic AcidThiazoles

Identifiers

PMID27442435
PMCPMC4956303
OpenAlexW2485056382

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.