Evidence map›Paper›PMID 27440755›Full record

ArticlePlant physiology2016

FUM2, a Cytosolic Fumarase, Is Essential for Acclimation to Low Temperature in Arabidopsis thaliana.

Beth C Dyson, Matthew A E Miller, Regina Feil, Nicholas Rattray, Caroline G Bowsher, Royston Goodacre, John E Lunn, Giles N Johnson

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
9.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
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  7. Photosynthetic acclimation to changing environments.Biochemical Society transactions · 2023
    Review
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  9. CAM photosynthesis: the acid test.The New phytologist · 2022
    Article
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  11. Emerging Role of TCA Cycle-Related Enzymes in Human Diseases.International journal of molecular sciences · 2021
    Review
  12. Article
  13. Review
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  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Beth C DysonFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom (B.C.D., M.A.E.M., C.G.B., G.N.J.);Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany (R.F., J.E.L.); andSchool of Chemistry and Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, United Kingdom (N.R., R.G.).
Matthew A E MillerFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom (B.C.D., M.A.E.M., C.G.B., G.N.J.);Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany (R.F., J.E.L.); andSchool of Chemistry and Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, United Kingdom (N.R., R.G.).
Regina FeilFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom (B.C.D., M.A.E.M., C.G.B., G.N.J.);Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany (R.F., J.E.L.); andSchool of Chemistry and Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, United Kingdom (N.R., R.G.).
Nicholas RattrayFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom (B.C.D., M.A.E.M., C.G.B., G.N.J.);Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany (R.F., J.E.L.); andSchool of Chemistry and Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, United Kingdom (N.R., R.G.).
Caroline G BowsherFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom (B.C.D., M.A.E.M., C.G.B., G.N.J.);Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany (R.F., J.E.L.); andSchool of Chemistry and Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, United Kingdom (N.R., R.G.).
Royston GoodacreFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom (B.C.D., M.A.E.M., C.G.B., G.N.J.);Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany (R.F., J.E.L.); andSchool of Chemistry and Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, United Kingdom (N.R., R.G.).ORCID 0000-0003-2230-645X
John E LunnFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom (B.C.D., M.A.E.M., C.G.B., G.N.J.);Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany (R.F., J.E.L.); andSchool of Chemistry and Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, United Kingdom (N.R., R.G.).ORCID 0000-0001-8533-3004
Giles N JohnsonFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom (B.C.D., M.A.E.M., C.G.B., G.N.J.);Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany (R.F., J.E.L.); andSchool of Chemistry and Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, United Kingdom (N.R., R.G.) giles.johnson@manchester.ac.uk.ORCID 0000-0003-1536-5582
University of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J04103/1
6 · The paper itself

Abstract

Although cold acclimation is a key process in plants from temperate climates, the mechanisms sensing low temperature remain obscure. Here, we show that the accumulation of the organic acid fumaric acid, mediated by the cytosolic fumarase FUM2, is essential for cold acclimation of metabolism in the cold-tolerant model species Arabidopsis (Arabidopsis thaliana). A nontargeted metabolomic approach, using gas chromatography-mass spectrometry, identifies fumarate as a key component of the cold response in this species. Plants of T-DNA insertion mutants, lacking FUM2, show marked differences in their response to cold, with contrasting responses both in terms of metabolite concentrations and gene expression. The fum2 plants accumulated higher concentrations of phosphorylated sugar intermediates and of starch and malate. Transcripts for proteins involved in photosynthesis were markedly down-regulated in fum2.2 but not in wild-type Columbia-0. Plants of fum2 show a complete loss of the ability to acclimate photosynthesis to low temperature. We conclude that fumarate accumulation plays an essential role in low temperature sensing in Arabidopsis, either indirectly modulating metabolic or redox signals or possibly being itself directly involved in cold sensing.

Indexed as

AcclimatizationCold TemperatureArabidopsisArabidopsis ProteinsChromatography, LiquidCytosolFumarate HydrataseFumaratesGas Chromatography-Mass SpectrometryGene Expression ProfilingGene Expression Regulation, PlantMetabolomeMetabolomicsMutationPhotosynthesisPlants, Genetically ModifiedArabidopsis ProteinsFumarate HydrataseFumaratesSucrose

Identifiers

PMID27440755
PMCPMC5074615
OpenAlexW2491980619

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.