Evidence map›Paper›PMID 27436046›Full record

ArticleScientific reports2016

Genomic content typifying a prevalent clade of bovine mastitis-associated Escherichia coli.

Robert J Goldstone, Susan Harris, David G E Smith

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 51 citations in OpenAlex.

  1. Comparative genomic analysis ofMicrobial genomics · 2025
    Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Construction of the waaF Subunit and DNA Vaccine AgainstFrontiers in veterinary science · 2022
    Article
  10. Frontiers in microbiology · 2022
    Review
  11. Article
  12. Comparative genomic analysis ofMicrobial genomics · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Robert J GoldstoneHeriot-Watt University, School of Life Sciences, Edinburgh Campus, EH14 4AS, Scotland.
Susan HarrisHeriot-Watt University, School of Life Sciences, Edinburgh Campus, EH14 4AS, Scotland.
David G E SmithHeriot-Watt University, School of Life Sciences, Edinburgh Campus, EH14 4AS, Scotland.

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

E. coli represents a heterogeneous population with capabilities to cause disease in several anatomical sites. Among sites that can be colonised is the bovine mammary gland (udder) and a distinct class of mammary pathogenic E. coli (MPEC) has been proposed. MPEC are the principle causative agents of bovine mastitis in well-managed dairy farms, costing producers in the European Union an estimated €2 billion per year. Despite the economic impact, and the threat this disease presents to small and medium sized dairy farmers, the factors which mediate the ability for E. coli to thrive in bovine mammary tissue remain poorly elucidated. Strains belonging to E. coli phylogroup A are most frequently isolated from mastitis. In this paper, we apply a population level genomic analysis to this group of E. coli to uncover genomic signatures of mammary infectivity. Through a robust statistical analysis, we show that not all strains of E. coli are equally likely to cause mastitis, and those that do possess specific gene content that may promote their adaptation and survival in the bovine udder. Through a pan-genomic analysis, we identify just three genetic loci which are ubiquitous in MPEC, but appear dispensable for E. coli from other niches.

Indexed as

AnimalsCattleEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsFemaleGenome, BacterialGenomicsMammary Glands, AnimalMastitis, BovinePhylogenyEscherichia coli Proteins

Identifiers

PMID27436046
PMCPMC4951805
OpenAlexW2478011462

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.