Evidence map›Paper›PMID 27435399›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2017

PI3K/Akt/mTOR Signaling and Plasma Membrane Proteins Are Implicated in Responsiveness to Adjuvant Dendritic Cell Vaccination for Metastatic Colorectal Cancer.

David C Qian, Xiangjun Xiao, Jinyoung Byun, Arief A Suriawinata, Stephanie C Her, Christopher I Amos, Richard J Barth

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

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  12. Basics to advances in nanotherapy of colorectal cancer.Drug delivery and translational research · 2020
    Review
  13. Deoxyshikonin isolated fromPharmaceutical biology · 2019
    Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

David C QianDepartment of Biomedical Data Science, Dartmouth Geisel School of Medicine, Lebanon, New Hampshire.
Xiangjun XiaoDepartment of Biomedical Data Science, Dartmouth Geisel School of Medicine, Lebanon, New Hampshire.
Jinyoung ByunDepartment of Biomedical Data Science, Dartmouth Geisel School of Medicine, Lebanon, New Hampshire.
Arief A SuriawinataDepartment of Pathology, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire.
Stephanie C HerDepartment of Computer Science, Dartmouth College, Hanover, New Hampshire.
Christopher I AmosDepartment of Biomedical Data Science, Dartmouth Geisel School of Medicine, Lebanon, New Hampshire. Richard.J.Barth.Jr@hitchcock.org Christopher.I.Amos@dartmouth.edu.
Richard J BarthDepartment of Surgery, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire. Richard.J.Barth.Jr@hitchcock.org Christopher.I.Amos@dartmouth.edu.
Dartmouth–Hitchcock Medical Center · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Steven D Leach · 1985 to 2026
$91.3M
Quantitative Biology Research InstituteP20GM103534 · NIGMS · DARTMOUTH COLLEGE · PI AMOS, CHRISTOPHER I. · 2012 to 2016
$8.6M
Training Program for Quantitative Population Sciences in CancerR25CA134286 · NCI · DARTMOUTH COLLEGE · PI KARAGAS, MARGARET RITA, TOSTESON, TOR D · 2009 to 2018
$3.0M
NCI NIH HHS P30 CA023108NCI NIH HHS R25 CA134286NIGMS NIH HHS P20 GM103534
6 · The paper itself

Abstract

purposeWe have previously demonstrated that patients with metastatic colorectal cancer who exhibit immune responses to a dendritic cell (DC) vaccine have superior recurrence-free survival following surgery, compared with patients in whom responses do not occur. We sought to characterize the patterns of T-lymphocyte infiltration and somatic mutations in metastases that are associated with and predictive of response to the DC vaccine. EXPERIMENTAL

designCytotoxic, memory, and regulatory T cells in resected metastases and surrounding normal liver tissue from 22 patients (11 responders and 11 nonresponders) were enumerated by immunohistochemistry prior to vaccine administration. In conjunction with tumor sequencing, the combined multivariate and collapsing method was used to identify gene mutations that are associated with vaccine response. We also derived a response prediction score for each patient using his/her tumor genotype data and variant association effect sizes computed from the other 21 patients; greater weighting was placed on gene products with cell membrane-related functions.

resultsThere was no correlation between vaccine response and intratumor, peritumor, or hepatic densities of T-cell subpopulations. Associated genes were found to be enriched in the PI3K/Akt/mTOR signaling axis (P < 0.001). Applying a consistent prediction score cutoff over 22 rounds of leave-one-out cross-validation correctly inferred vaccine response in 21 of 22 patients (95%).

conclusionsAdjuvant DC vaccination has shown promise as a form of immunotherapy for patients with metastatic colorectal cancer. Its efficacy may be influenced by somatic mutations that affect pathways involving PI3K, Akt, and mTOR, as well as tumor surface proteins. Clin Cancer Res; 23(2); 399-406. ©2016 AACR.

Indexed as

Cell- and Tissue-Based TherapyImmunotherapyAgedCancer VaccinesColorectal NeoplasmsDendritic CellsDrug Resistance, NeoplasmFemaleHumansMaleMembrane ProteinsMiddle AgedMutationNeoplasm MetastasisPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktCancer VaccinesMembrane ProteinsMTOR protein, humanPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktTOR Serine-Threonine Kinases

Identifiers

PMID27435399
PMCPMC5611841
OpenAlexW2485111356

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.