Evidence map›Paper›PMID 27432993›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Plastidial metabolite MEcPP induces a transcriptionally centered stress-response hub via the transcription factor CAMTA3.

Geoffrey Benn, Marta Bjornson, Haiyan Ke, Amancio De Souza, Edward I Balmond, Jared T Shaw, Katayoon Dehesh

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 80 citations in OpenAlex.

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  16. Chloroplast ROS and stress signaling.Plant communications · 2022
    Review
  17. Function of Chloroplasts in Plant Stress Responses.International journal of molecular sciences · 2021
    Review
  18. Hot topic: Thermosensing in plants.Plant, cell & environment · 2021
    Review
  19. TheFrontiers in plant science · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Geoffrey BennDepartment of Plant Biology, University of California, Davis, CA 95616;
Marta BjornsonDepartment of Plant Biology, University of California, Davis, CA 95616; Department of Plant Sciences, University of California, Davis, CA 95616;
Haiyan KeDepartment of Plant Biology, University of California, Davis, CA 95616;
Amancio De SouzaDepartment of Plant Biology, University of California, Davis, CA 95616;
Edward I BalmondDepartment of Chemistry, University of California, Davis, CA 95616.
Jared T ShawDepartment of Chemistry, University of California, Davis, CA 95616.
Katayoon DeheshDepartment of Plant Biology, University of California, Davis, CA 95616; katayoon.dehesh@ucr.edu.
University of California, Davis · US

Funding

Defining the Retrograde Plastid-to-Nucleus Stress Signaling PathwayR01GM107311 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI DEHESH, KATAYOON · 2013 to 2021
$2.5M
NIGMS NIH HHS R01 GM107311
6 · The paper itself

Abstract

The general stress response (GSR) is an evolutionarily conserved rapid and transient transcriptional reprograming of genes central for transducing environmental signals into cellular responses, leading to metabolic and physiological readjustments to cope with prevailing conditions. Defining the regulatory components of the GSR will provide crucial insight into the design principles of early stress-response modules and their role in orchestrating master regulators of adaptive responses. Overaccumulation of methylerythritol cyclodiphosphate (MEcPP), a bifunctional chemical entity serving as both a precursor of isoprenoids produced by the plastidial methylerythritol phosphate (MEP) pathway and a stress-specific retrograde signal, in ceh1 (constitutively expressing hydroperoxide lyase1)-mutant plants leads to large-scale transcriptional alterations. Bioinformatic analyses of microarray data in ceh1 plants established the overrepresentation of a stress-responsive cis element and key GSR marker, the rapid stress response element (RSRE), in the promoters of robustly induced genes. ceh1 plants carrying an established 4×RSRE:Luciferase reporter for monitoring the GSR support constitutive activation of the response in this mutant background. Genetics and pharmacological approaches confirmed the specificity of MEcPP in RSRE induction via the transcription factor CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3 (CAMTA3), in a calcium-dependent manner. Moreover, CAMTA3-dependent activation of IRE1a (inositol-requiring protein-1) and bZIP60 (basic leucine zipper 60), two RSRE containing unfolded protein-response genes, bridges MEcPP-mediated GSR induction to the potentiation of protein-folding homeostasis in the endoplasmic reticulum. These findings introduce the notion of transcriptional regulation by a key plastidial retrograde signaling metabolite that induces nuclear GSR, thereby offering a window into the role of interorgannellar communication in shaping cellular adaptive responses.

Indexed as

Gene Expression Regulation, PlantStress, PhysiologicalArabidopsisArabidopsis ProteinsCalciumEnzymesErythritolGene Expression ProfilingGene OntologyMutationPlant Growth RegulatorsPlastidsResponse ElementsSugar PhosphatesTranscription FactorsUnfolded Protein Response2-C-methylerythritol 4-phosphateArabidopsis ProteinsAT2G22300 protein, ArabidopsisCalciumEnzymesErythritolhydroxymethylbutenyl 4-diphosphate synthasemethyl-D-erythritol 2,4-cyclodiphosphatePlant Growth RegulatorsSugar PhosphatesTranscription FactorsCAMTA3GSRMEcPPretrograde signalsRSRE

Identifiers

PMID27432993
PMCPMC4978302
OpenAlexW2505272467

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.