Evidence map›Paper›PMID 27432873›Full record

ArticleThe Plant cell2016

SHORT-ROOT Deficiency Alleviates the Cell Death Phenotype of the Arabidopsis catalase2 Mutant under Photorespiration-Promoting Conditions.

Cezary Waszczak, Pavel I Kerchev, Per Mühlenbock, Frank A Hoeberichts, Katrien Van Der Kelen, Amna Mhamdi, Patrick Willems, Jordi Denecker, Robert P Kumpf, Graham Noctor and 2 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
11.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  6. Genes · 2023
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  7. Nuclear and peroxisomal targeting of catalase.Plant, cell & environment · 2022
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  12. Article
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  14. Investigations on the phytotoxicity of perfluorooctanoic acid in Arabidopsis thaliana.Environmental science and pollution research international · 2020
    Article
  15. Article
  16. Review
  17. Bifunctional Chloroplastic DJ-1B fromAntioxidants (Basel, Switzerland) · 2019
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Cezary WaszczakDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium Structural Biology Research Center, VIB, 1050 Brussels, Belgium Structural Biology Brussels Laboratory, Vrije Universiteit Brussel, 1050 Brussels, Belgium Brussels Center for Redox Biology, 1050 Brussels, Belgium Division of Plant Biology, Department of Biosciences, Viikki Plant Science Center, University of Helsinki, FI-00014 Helsinki, Finland.
Pavel I KerchevDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0003-2737-0493
Per MühlenbockDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0003-3097-8387
Frank A HoeberichtsDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Katrien Van Der KelenDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Amna MhamdiDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium Institute of Plant Sciences Paris Saclay IPS2, CNRS, INRA, Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France Institute of Plant Sciences Paris-Saclay IPS2, Paris Diderot, Sorbonne Paris-Cité, 91405 Orsay, France.ORCID 0000-0001-9959-1362
Patrick WillemsDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0003-4667-2294
Jordi DeneckerDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Robert P KumpfDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Graham NoctorInstitute of Plant Sciences Paris Saclay IPS2, CNRS, INRA, Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France Institute of Plant Sciences Paris-Saclay IPS2, Paris Diderot, Sorbonne Paris-Cité, 91405 Orsay, France.ORCID 0000-0003-1980-4554
Joris MessensStructural Biology Research Center, VIB, 1050 Brussels, Belgium Structural Biology Brussels Laboratory, Vrije Universiteit Brussel, 1050 Brussels, Belgium Brussels Center for Redox Biology, 1050 Brussels, Belgium.ORCID 0000-0002-2128-8264
Frank Van BreusegemDepartment of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium frank.vanbreusegem@psb.vib-ugent.be.ORCID 0000-0002-3147-0860
Ghent University · BEUniversité Paris-Sud · FRUniversity of Helsinki · FIVrije Universiteit Brussel · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hydrogen peroxide (H2O2) can act as a signaling molecule that influences various aspects of plant growth and development, including stress signaling and cell death. To analyze molecular mechanisms that regulate the response to increased H2O2 levels in plant cells, we focused on the photorespiration-dependent peroxisomal H2O2 production in Arabidopsis thaliana mutants lacking CATALASE2 (CAT2) activity (cat2-2). By screening for second-site mutations that attenuate the PSII maximum efficiency (Fv'/Fm') decrease and lesion formation linked to the cat2-2 phenotype, we discovered that a mutation in SHORT-ROOT (SHR) rescued the cell death phenotype of cat2-2 plants under photorespiration-promoting conditions. SHR deficiency attenuated H2O2-dependent gene expression, oxidation of the glutathione pool, and ascorbate depletion in a cat2-2 genetic background upon exposure to photorespiratory stress. Decreased glycolate oxidase and catalase activities together with accumulation of glycolate further implied that SHR deficiency impacts the cellular redox homeostasis by limiting peroxisomal H2O2 production. The photorespiratory phenotype of cat2-2 mutants did not depend on the SHR functional interactor SCARECROW and the sugar signaling component ABSCISIC ACID INSENSITIVE4, despite the requirement for exogenous sucrose for cell death attenuation in cat2-2 shr-6 double mutants. Our findings reveal a link between SHR and photorespiratory H2O2 production that has implications for the integration of developmental and stress responses.

Indexed as

ArabidopsisArabidopsis ProteinsCatalaseCell DeathGene Expression Regulation, PlantHydrogen PeroxideOxidation-ReductionPlants, Genetically ModifiedSignal TransductionTranscription FactorsArabidopsis ProteinsCatalaseHydrogen PeroxideSHORT ROOT protein, ArabidopsisTranscription Factors

Identifiers

PMID27432873
PMCPMC5006698
OpenAlexW2475425734

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.