Evidence map›Paper›PMID 27432341›Full record

ArticleJournal of microbiological methods2016

Genetic Diversity and Evidence for Transmission of Streptococcus mutans by DiversiLab rep-PCR.

Stephanie S Momeni, Jennifer Whiddon, Kyounga Cheon, Tariq Ghazal, Stephen A Moser, Noel K Childers

Abstract read
In one paragraph

Article in Journal of microbiological methods, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Plasmalogen, a glycerophospholipid crucial forApplied and environmental microbiology · 2024
    Article
  5. Intraspecies interactions ofbioRxiv : the preprint server for biology · 2023
    Article
  6. Article
  7. Caries-Associated Biosynthetic Gene Clusters inJournal of dental research · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Stephanie S MomeniDepartment of Pediatric Dentistry, The University of Alabama at Birmingham, The School of Dentistry Building Room 304, 1720 2nd Avenue South, Birmingham, AL 35294-0007, USA. Electronic address: sks@uab.edu.
Jennifer WhiddonDepartment of Pathology, The University of Alabama at Birmingham, West Pavilion Room, 1720 2nd Avenue South, Birmingham, AL 35294-0007, USA. Electronic address: jwhiddon@uabmc.edu.
Kyounga CheonDepartment of Pediatric Dentistry, The University of Alabama at Birmingham, The School of Dentistry Building Room 304, 1720 2nd Avenue South, Birmingham, AL 35294-0007, USA. Electronic address: kcheon@uab.edu.
Tariq GhazalDepartment of Pediatric Dentistry, The University of Alabama at Birmingham, The School of Dentistry Building Room 304, 1720 2nd Avenue South, Birmingham, AL 35294-0007, USA. Electronic address: tghazal@uab.edu.
Stephen A MoserDepartment of Pathology, The University of Alabama at Birmingham, West Pavilion Room, 1720 2nd Avenue South, Birmingham, AL 35294-0007, USA. Electronic address: moser@uab.edu.
Noel K ChildersDepartment of Pediatric Dentistry, The University of Alabama at Birmingham, The School of Dentistry Building Room 304, 1720 2nd Avenue South, Birmingham, AL 35294-0007, USA. Electronic address: nkc@uab.edu.

Funding

Epidemiology of Dental Caries and Immunity in ChildrenR01DE016684 · NIDCR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CHILDERS, NOEL K · 2006 to 2013
$6.8M
Dental Academic Research Training Program (DART)T90DE022736 · NIDCR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Amjad Javed · 2012 to 2026
$6.7M
NIDCR NIH HHS R01 DE016684NIDCR NIH HHS T90 DE022736
6 · The paper itself

Abstract

This two-part study investigated the genetic diversity and transmission of Streptococcus mutans using the DiversiLab repetitive extragenic palindromic PCR (rep-PCR) approach. For children with S. mutans and participating household members, analysis for evidence of unrelated child-to-child as well as intra-familial transmission was evaluated based on commonality of genotypes. A total of 169 index children and 425 household family members from Uniontown, Alabama were evaluated for genetic diversity using rep-PCR. Thirty-four unique rep-PCR genotypes were observed for 13,906 S. mutans isolates. For transmission, 117 child and household isolates were evaluated for shared genotype (by child and by genotype cases, multiple matches possible for each child). Overall, children had 1-9 genotypes and those with multiple genotypes were 2.3 times more likely to have caries experience (decayed, missing and filled teeth/surfaces>0). Only 28% of children shared all genotypes within the household, while 72% had at least 1 genotype not shared with anyone in the household. Children had genotype(s) not shared with any household members in 157 cases. In 158 cases children and household members shared a genotype in which 55% (87/158 cases) were shared with more than one family member. Children most frequently shared genotypes with their mothers (54%; 85/158), siblings (46%; 72/158) and cousins (23%; 37/158). A reference library for S. mutans for epidemiological surveillance using the DiversiLab rep-PCR approach is detailed. The genetic diversity of S. mutans in this population demonstrated frequent commonality of genotypes. Evidence for both child-to-child and intra-familial transmission of S. mutans was observed by rep-PCR.

Indexed as

Genetic VariationAlabamaChildChild, PreschoolCost-Benefit AnalysisDental CariesFemaleGene LibraryGenotyping TechniquesHumansInfantLogistic ModelsLongitudinal StudiesMaleMultilocus Sequence TypingPolymerase Chain Reactiongenetic diversitygenotypingmultilocus sequence typingrep-PCRStreptococcus mutanstransmission

Identifiers

PMID27432341
PMCPMC5004344

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.