Evidence map›Paper›PMID 27431323›Full record

ArticleNucleic acids research2016

Tunable regulation of CREB DNA binding activity couples genotoxic stress response and metabolism.

Sang Hwa Kim, Anthony T Trinh, Michele Campaigne Larsen, Adam S Mastrocola, Colin R Jefcoate, Pierre R Bushel, Randal S Tibbetts

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Multi-faceted regulation of CREB family transcription factors.Frontiers in molecular neuroscience · 2024
    Review
  5. Glutamine-rich regions of the disordered CREB transactivation domain mediate dynamic intra- and intermolecular interactions.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Fused in sarcoma regulates DNA replication timing and kinetics.The Journal of biological chemistry · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. ATM-dependent pathways of chromatin remodelling and oxidative DNA damage responses.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sang Hwa KimDepartment of Human Oncology, University of Wisconsin-Madison School of Medicine and Public Health, Madison, WI 53705, USA.
Anthony T TrinhDepartment of Human Oncology, University of Wisconsin-Madison School of Medicine and Public Health, Madison, WI 53705, USA.
Michele Campaigne LarsenDepartment of Cell and Regenerative Biology, University of Wisconsin-Madison School of Medicine and Public Health, Madison, WI 53705, USA.
Adam S MastrocolaDepartment of Human Oncology, University of Wisconsin-Madison School of Medicine and Public Health, Madison, WI 53705, USA.
Colin R JefcoateDepartment of Cell and Regenerative Biology, University of Wisconsin-Madison School of Medicine and Public Health, Madison, WI 53705, USA.
Pierre R BushelBiostatistics and Computational Biology Branch, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Randal S TibbettsDepartment of Human Oncology, University of Wisconsin-Madison School of Medicine and Public Health, Madison, WI 53705, USA rstibbetts@wisc.edu.
University of Wisconsin–Madison · USNational Institute of Environmental Health Sciences · US

Funding

Microarray and Genome InformaticsZIAES102345 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI BUSHEL, ROBERT · 2009 to 2021
$10.8M
6 · The paper itself

Abstract

cAMP response element binding protein (CREB) is a key regulator of glucose metabolism and synaptic plasticity that is canonically regulated through recruitment of transcriptional coactivators. Here we show that phosphorylation of CREB on a conserved cluster of Ser residues (the ATM/CK cluster) by the DNA damage-activated protein kinase ataxia-telangiectasia-mutated (ATM) and casein kinase1 (CK1) and casein kinase2 (CK2) positively and negatively regulates CREB-mediated transcription in a signal dependent manner. In response to genotoxic stress, phosphorylation of the ATM/CK cluster inhibited CREB-mediated gene expression, DNA binding activity and chromatin occupancy proportional to the number of modified Ser residues. Paradoxically, substoichiometric, ATM-independent, phosphorylation of the ATM/CK cluster potentiated bursts in CREB-mediated transcription by promoting recruitment of the CREB coactivator, cAMP-regulated transcriptional coactivators (CRTC2). Livers from mice expressing a non-phosphorylatable CREB allele failed to attenuate gluconeogenic genes in response to DNA damage or fully activate the same genes in response to glucagon. We propose that phosphorylation-dependent regulation of DNA binding activity evolved as a tunable mechanism to control CREB transcriptional output and promote metabolic homeostasis in response to rapidly changing environmental conditions.

Indexed as

DNA DamageGene Expression RegulationAmino Acid SequenceAnimalsAtaxia Telangiectasia Mutated ProteinsBinding SitesCell LineCyclic AMPCyclic AMP Response Element-Binding ProteinDNAEnergy MetabolismGluconeogenesisMaleMiceMice, KnockoutPhosphorylationAtaxia Telangiectasia Mutated ProteinsCrtc2 protein, mouseCyclic AMPCyclic AMP Response Element-Binding ProteinDNATranscription Factors

Identifiers

PMID27431323
PMCPMC5175338
OpenAlexW2488258655

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.