Evidence map›Paper›PMID 27431295›Full record

ArticleMolecular psychiatry2017

Exome-sequencing in a large population-based study reveals a rare Asn396Ser variant in the LIPG gene associated with depressive symptoms.

N Amin, O Jovanova, H H H Adams, A Dehghan, M Kavousi, M W Vernooij, R P Peeters, F M S de Vrij, S J van der Lee, J G J van Rooij and 16 more

Erratum issuedOpen access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Molecular psychiatry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 4 institutions in 2 countries.

N AminGenetic Epidemiology Unit, Department of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
O JovanovaDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
H H H AdamsDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
A DehghanDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
M KavousiDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
M W VernooijDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
R P PeetersDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
F M S de VrijDepartment of Psychiatry, Erasmus MC, Rotterdam, The Netherlands.
S J van der LeeGenetic Epidemiology Unit, Department of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
J G J van RooijDepartment of Internal Medicine, Erasmus MC, Rotterdam, The Netherlands.
E M van LeeuwenGenetic Epidemiology Unit, Department of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
L ChakerDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
A DemirkanGenetic Epidemiology Unit, Department of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
A HofmanDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
R W W BrouwerCenter for Biomics, Department of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
R KraaijDepartment of Internal Medicine, Erasmus MC, Rotterdam, The Netherlands.
K Willems van DijkDepartment of Human Genetics, Leiden University Medical Center, RC Leiden, The Netherlands.
T HankemeierLeiden Academic Center for Drug Research, Division of Analytical Biosciences, Leiden University, Leiden, The Netherlands.
W F J van IjckenCenter for Biomics, Department of Cell Biology, Erasmus MC, Rotterdam, The Netherlands.
A G UitterlindenDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
W J NiessenDepartments of Radiology and Medical Informatics, Erasmus MC, Rotterdam, The Netherlands.
O H FrancoDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
S A KushnerDepartment of Psychiatry, Erasmus MC, Rotterdam, The Netherlands.
M A IkramDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
H TiemeierDepartment of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.ORCID 0000-0002-4395-1397
C M van DuijnGenetic Epidemiology Unit, Department of Epidemiology, Erasmus MC, Rotterdam, The Netherlands.
Erasmus MC · NLLeiden University Medical Center · NLHarvard University · USLeiden University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite a substantial genetic component, efforts to identify common genetic variation underlying depression have largely been unsuccessful. In the current study we aimed to identify rare genetic variants that might have large effects on depression in the general population. Using high-coverage exome-sequencing, we studied the exonic variants in 1265 individuals from the Rotterdam study (RS), who were assessed for depressive symptoms. We identified a missense Asn396Ser mutation (rs77960347) in the endothelial lipase (LIPG) gene, occurring with an allele frequency of 1% in the general population, which was significantly associated with depressive symptoms (P-value=5.2 × 10

Indexed as

AdultAllelesAlzheimer DiseaseCholesterol, HDLDepressionDepressive DisorderExomeExonsFemaleGene FrequencyGenetic Predisposition to DiseaseGenetic VariationHeterozygoteHumansLipaseMaleCholesterol, HDLLipaseLIPG protein, human

Identifiers

PMID27431295
OpenAlexW2502421295

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.