Evidence map›Paper›PMID 27431218›Full record

ArticleAntimicrobial agents and chemotherapy2016

De Novo Characterization of Genes That Contribute to High-Level Ciprofloxacin Resistance in Escherichia coli.

Thu Tran, Qinghong Ran, Lev Ostrer, Arkady Khodursky

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Thu TranDepartment of Biochemistry, Molecular Biology and Biophysics and Biotechnology Institute, University of Minnesota, St. Paul, Minnesota, USA.
Qinghong RanDepartment of Biochemistry, Molecular Biology and Biophysics and Biotechnology Institute, University of Minnesota, St. Paul, Minnesota, USA.
Lev OstrerDepartment of Biochemistry, Molecular Biology and Biophysics and Biotechnology Institute, University of Minnesota, St. Paul, Minnesota, USA.
Arkady KhodurskyDepartment of Biochemistry, Molecular Biology and Biophysics and Biotechnology Institute, University of Minnesota, St. Paul, Minnesota, USA khodu001@umn.edu.
Biotechnology Institute · USUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sensitization of resistant bacteria to existing antibiotics depends on the identification of candidate targets whose activities contribute to resistance. Using a transposon insertion library in an Escherichia coli mutant that was 2,000 times less susceptible to ciprofloxacin than its parent and the relative fitness scores, we identified 19 genes that contributed to the acquired ciprofloxacin resistance and mapped the shortest genetic path that increased the antibiotic susceptibility of the resistant bacteria back to a near wild-type level.

Indexed as

Anti-Bacterial AgentsCiprofloxacinDNA Transposable ElementsDrug Resistance, BacterialEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialMicrobial Sensitivity TestsMutationAnti-Bacterial AgentsCiprofloxacinDNA Transposable ElementsEscherichia coli Proteins

Identifiers

PMID27431218
PMCPMC5038283
OpenAlexW2498011264

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.