Evidence map›Paper›PMID 27431206›Full record

ArticleMolecular brain2016

In vitro characterization of neurite extension using induced pluripotent stem cells derived from lissencephaly patients with TUBA1A missense mutations.

Yohei Bamba, Tomoko Shofuda, Mitsuhiro Kato, Ritsuko K Pooh, Yoko Tateishi, Jun-Ichi Takanashi, Hidetsuna Utsunomiya, Miho Sumida, Daisuke Kanematsu, Hiroshi Suemizu and 7 more

Open access · goldAbstract read
In one paragraph

Article in Molecular brain, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  3. iPSCs-Derived Neurons and Brain Organoids from Patients.Handbook of experimental pharmacology · 2023
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  13. TheJournal of developmental biology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 10 institutions in 2 countries.

Yohei BambaDepartment of Physiology, Keio University School of Medicine, 35 Shinanomachi, Shinjuku-ku, Tokyo, 160-8582, Japan.
Tomoko ShofudaDivision of Stem Cell Research, Institute for Clinical Research, Osaka National Hospital, National Hospital Organization, Osaka, Japan.
Mitsuhiro KatoDepartment of Pediatrics, Yamagata University Faculty of Medicine, 2-2-2 Iida-Nishi, Yamagata-shi, Yamagata, 990-9585, Japan.
Ritsuko K PoohCRIFM Clinical Research Institute of Fetal Medicine Pooh Maternity Clinic, 7-1-24 Uehommachi, Tennoji, Osaka, 543-0001, Japan.
Yoko TateishiDepartment of Obstetrics and Gynecology, Okayama Medical Center, National Hospital Organization, 1711-1 Tamasu, Okayama, Japan.
Jun-Ichi TakanashiDepartment of Pediatrics, Tokyo Women's Medical University, Yachiyo Medical Center, 477-96 Owadashinden, Yachiyo-shi, 276-8524, Japan.
Hidetsuna UtsunomiyaDepartment of Radiological Science, International University of Health and Welfare, Graduate School, 2-4-16, Momochihama, Sawara-ku, Fukuoka, 814-0001, Japan.
Miho SumidaDivision of Regenerative Medicine, Institute for Clinical Research, Osaka National Hospital, National Hospital Organization, 2-1-14 Hoenzaka, Chuo-ku, Osaka, 540-0006, Japan.
Daisuke KanematsuDivision of Regenerative Medicine, Institute for Clinical Research, Osaka National Hospital, National Hospital Organization, 2-1-14 Hoenzaka, Chuo-ku, Osaka, 540-0006, Japan.
Hiroshi SuemizuLaboratory Animal Research Department, Central Institute for Experimental Animals, 3-25-12 Tonomachi, Kawasaki-ku, Kawasaki, Kanagawa, 210-0821, Japan.
Yuichiro HiguchiLaboratory Animal Research Department, Central Institute for Experimental Animals, 3-25-12 Tonomachi, Kawasaki-ku, Kawasaki, Kanagawa, 210-0821, Japan.
Wado AkamatsuDepartment of Physiology, Keio University School of Medicine, 35 Shinanomachi, Shinjuku-ku, Tokyo, 160-8582, Japan.
Denis GallagherProgram in Neuroscience and Mental Health, The Hospital for Sick Children, Toronto, ON, M5G 0A7, Canada.
Freda D MillerProgram in Neuroscience and Mental Health, The Hospital for Sick Children, Toronto, ON, M5G 0A7, Canada.
Mami YamasakiDepartment of Pediatric Neurosurgery, Takatsuki General Hospital, 1-3-13、Kosobe cho, Takatsuki, 569-1192, Japan.
Yonehiro KanemuraDivision of Regenerative Medicine, Institute for Clinical Research, Osaka National Hospital, National Hospital Organization, 2-1-14 Hoenzaka, Chuo-ku, Osaka, 540-0006, Japan.
Hideyuki OkanoDepartment of Physiology, Keio University School of Medicine, 35 Shinanomachi, Shinjuku-ku, Tokyo, 160-8582, Japan. hidokano@a2.keio.jp.
Osaka National Hospital · JPCentral Institute for Experimental Animals · JPKeio University Hospital · JPFukuoka International University · JPHospital for Sick Children · CANational Hospital Organization · JPTakatsuki General Hospital · JPTokyo Women's Medical University · JPUniversity Health Network · CAYamagata University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLissencephaly, or smooth brain, is a severe congenital brain malformation that is thought to be associated with impaired neuronal migration during corticogenesis. However, the exact etiology of lissencephaly in humans remains unknown. Research on congenital diseases is limited by the shortage of clinically derived resources, especially for rare pediatric diseases. The research on lissencephaly is further limited because gyration in humans is more evolved than that in model animals such as mice. To overcome these limitations, we generated induced pluripotent stem cells (iPSCs) from the umbilical cord and peripheral blood of two lissencephaly patients with different clinical severities carrying alpha tubulin (TUBA1A) missense mutations (Patient A, p.N329S; Patient B, p.R264C).

resultsNeural progenitor cells were generated from these iPSCs (iPSC-NPCs) using SMAD signaling inhibitors. These iPSC-NPCs expressed TUBA1A at much higher levels than undifferentiated iPSCs and, like fetal NPCs, readily differentiated into neurons. Using these lissencephaly iPSC-NPCs, we showed that the neurons derived from the iPSCs obtained from Patient A but not those obtained from Patient B showed abnormal neurite extension, which correlated with the pathological severity in the brains of the patients.

conclusionWe established iPSCs derived from lissencephaly patients and successfully modeled one aspect of the pathogenesis of lissencephaly in vitro using iPSC-NPCs and iPSC-derived neurons. The iPSCs from patients with brain malformation diseases helped us understand the mechanism underlying rare diseases and human corticogenesis without the use of postmortem brains.

Indexed as

Base SequenceCell LineChild, PreschoolFluorescent DyesHumansInduced Pluripotent Stem CellsLissencephalyMagnetic Resonance ImagingMaleMutation, MissenseNeural Stem CellsNeuritesNeurogliaSmad ProteinsSpheroids, CellularTubulinFluorescent DyesSmad ProteinsTUBA1A protein, humanTubulinInduced pluripotent stem cellsLissencephalyNeural progenitor cellsTUBA1A

Identifiers

PMID27431206
PMCPMC4950778
OpenAlexW2464258256

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.