Evidence map›Paper›PMID 27429906›Full record

ArticleNeuroepigenetics2016

Cross-species Analyses Unravel the Complexity of H3K27me3 and H4K20me3 in the Context of Neural Stem Progenitor Cells.

Christopher T Rhodes, Richard S Sandstrom, Shu-Wei Angela Huang, Yufeng Wang, Gunnar Schotta, Mitchel S Berger, Chin-Hsing Annie Lin

Open access · hybridAbstract read
In one paragraph

Article in Neuroepigenetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. The SUV4-20H Histone Methyltransferases in Health and Disease.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Review
  9. Review
  10. Is There a Histone Code for Cellular Quiescence?Frontiers in cell and developmental biology · 2021
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Christopher T RhodesDepartment of Biology, University of Texas at San Antonio, San Antonio, Texas 78249, USA.
Richard S SandstromDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Shu-Wei Angela HuangDepartment of Biology, University of Texas at San Antonio, San Antonio, Texas 78249, USA.
Yufeng WangDepartment of Biology, University of Texas at San Antonio, San Antonio, Texas 78249, USA.
Gunnar SchottaLudwig Maximilians University and Munich Center for Integrated Protein Science (CiPSM), Biomedical Center, Planegg-Martinsried, Germany.
Mitchel S BergerDepartment of Neurological Surgery, University of California at San Francisco, San Francisco, California 94143, USA.
Chin-Hsing Annie LinDepartment of Biology, University of Texas at San Antonio, San Antonio, Texas 78249, USA; Neuroscience Institute, University of Texas at San Antonio, San Antonio, Texas 78249, USA.
The University of Texas at San Antonio · USCenter for Integrated Protein Science Munich · DENeurological Surgery · USUniversity of Washington · US

Funding

The Southwest National Primate Research Center Supplement- Infrastructure improvements of ABSL2 holding areasP51OD011133 · OD · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI Larry S. Schlesinger · 2012 to 2026
$129.7M
Tissue CoreP50CA097257 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joseph F Costello · 2002 to 2026
$57.4M
Systems Biology of Plasmodium falciparum: Building and Exploring Network ModelsSC1GM100806 · NIGMS · UNIVERSITY OF TEXAS SAN ANTONIO · PI WANG, YUFENG · 2012 to 2015
$1.5M
Aberrant Epigenetic Repression in Esophageal MalignancySC3GM112543 · NIGMS · UNIVERSITY OF TEXAS SAN ANTONIO · PI LIN, CHIN-HSING ANNIE · 2015 to 2018
$425k
NCI NIH HHS P50 CA097257NIGMS NIH HHS SC1 GM100806NIGMS NIH HHS SC3 GM112543NIH HHS P51 OD011133
6 · The paper itself

Abstract

Neural stem progenitor cells (NSPCs) in the human subventricular zone (SVZ) potentially contribute to life-long neurogenesis, yet subtypes of glioblastoma multiforme (GBM) contain NSPC signatures that highlight the importance of cell fate regulation. Among numerous regulatory mechanisms, the post-translational methylations onto histone tails are crucial regulator of cell fate. The work presented here focuses on the role of two repressive chromatin marks tri-methylations on histone H3 lysine 27 (H3K27me3) and histone H4 lysine 20 (H4K20me3) in the adult NSPC within the SVZ. To best model healthy human NSPCs as they exist

Indexed as

Chromatin Immunoprecipitation (ChIP)Cre recombinant proteinEnhancer of zeste (Human- Gene: EZH2, Protein: EZH2) (Mouse- Gene: Ezh2, Protein: Histone-lysine N-methyltransferase EZH2)Epigenetic RepressionGlioblastoma Multiforme (GBM)Neural Stem Progenitor Cells (NSPCs)Stereotaxic injectionSuppressor of variegation homolog 1 (Human- Gene: KMT5B or SUV420H1, Protein: lysine methyltransferase 5B, synonym Suv4-20h1) (Mouse- Gene: Suv4-20h1, synonym Kmt5b, Protein: Histone-lysine N-methyltransferase KMT5B, synonym Suv4-20h1)Suppressor of variegation homolog 2 (Human- Gene: KMT5C or SUV420H2, Protein: lysine methyltransferase 5C, synonym Suv4-20h2) (Mouse- Gene: Suv4-20h2, synonym Kmt5c, Protein: Histone-lysine N-methyltransferase KMT5C, synonym Suv4-20h2)tri-methylation at histone 3 lysine 27 (H3K27me3) and histone 4 lysine 20 (H4K20me3).

Identifiers

PMID27429906
PMCPMC4941106
OpenAlexW2345849902

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.