Evidence map›Paper›PMID 27428426›Full record

ArticleEBioMedicine2016

Decreased Usage of Specific Scrib Exons Defines a More Malignant Phenotype of Breast Cancer With Worsened Survival.

Gergana Metodieva, Samson Adoki, Berthold Lausen, Metodi V Metodiev

Open access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Gergana MetodievaSchool of Biological Sciences, University of Essex, CO4 3SQ, United Kingdom.
Samson AdokiSchool of Biological Sciences, University of Essex, CO4 3SQ, United Kingdom.
Berthold LausenDepartment of Mathematical Sciences, University of Essex, CO4 3SQ, United Kingdom.
Metodi V MetodievSchool of Biological Sciences, University of Essex, CO4 3SQ, United Kingdom. Electronic address: mmetod@essex.ac.uk.
University of Essex · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SCRIB is a polarity regulator known to be abnormally expressed in cancer at the protein level. Here we report that, in breast cancer, an additional and hidden dimension of deregulations exists: an unexpected SCRIB exon usage pattern appears to mark a more malignant tumor phenotype and significantly correlates with survival. Conserved exons encoding the leucine-rich repeats tend to be overexpressed while others are underused. Mechanistic studies revealed that the underused exons encode part of the protein necessary for interaction with Vimentin and Numa1, a protein which is required for proper positioning of the mitotic spindle. Thus, the inclusion/exclusion of specific SCRIB exons is a mechanistic hallmark of breast cancer, which could potentially be exploited to develop more efficient diagnostics and therapies.

Indexed as

Alternative SplicingExonsBreast NeoplasmsCell LineCell PolarityCluster AnalysisFemaleGene ExpressionGene Expression ProfilingHEK293 CellsHumansMembrane ProteinsMitosisPhenotypePrognosisProtein Interaction Domains and MotifsMembrane ProteinsSCRIB protein, humanTumor Suppressor ProteinsBreast cancerMitosisPolaritySCRIBSplicingSurvival

Identifiers

PMID27428426
PMCPMC4919504
OpenAlexW2347091803

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.