Evidence map›Paper›PMID 27427769›Full record

ArticlePloS one2016

A Sensitive and Robust High-Throughput Screening Assay for Inhibitors of the Chikungunya Virus nsP1 Capping Enzyme.

Kristen M Bullard-Feibelman, Benjamin P Fuller, Brian J Geiss

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Small Molecule Inhibitors Targeting Chikungunya Virus.Current topics in microbiology and immunology · 2022
    Review
  7. Enzymatic Assays to Explore Viral mRNA Capping Machinery.Chembiochem : a European journal of chemical biology · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kristen M Bullard-FeibelmanDepartment of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, United States of America.
Benjamin P FullerDepartment of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, United States of America.
Brian J GeissDepartment of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, United States of America.
Colorado State University · US

Funding

A High-Throughput Screen for Antiviral Inhibitors of the Alphavirus RNA Capping EnzymeR01AI114675 · NIAID · COLORADO STATE UNIVERSITY · PI GEISS, BRIAN · 2015 to 2017
$1.1M
NIAID NIH HHS R01 AI114675
6 · The paper itself

Abstract

Chikungunya virus (CHIKV) is a mosquito-borne Alphavirus that causes severe and debilitating disease symptoms. Alarmingly, transmission rates of CHIKV have increased dramatically over the last decade resulting in 1.7 million suspected cases in the Western hemisphere alone. There are currently no antivirals for treatment of CHIKV infection and novel anti-alphaviral compounds are badly needed. nsP1 is the alphavirus protein responsible for the methyltransferase and guanylyltransferase activities necessary for formation of the 5' type 0 cap structure added to newly formed viral RNA. Formation of this cap depends on nsP1 binding GTP and transferring a methylated GMP to nascent viral RNA. We have developed a fluorescence polarization-based assay that monitors displacement of a fluorescently-labeled GTP analog in real time. Determining the relative affinities of 15 GTP analogs for nsP1 GTP revealed important structural aspects of GTP that will inform identification of inhibitors able to outcompete GTP for the nsP1 binding site. Validation of the assay for HTS was completed and a secondary orthogonal assay that measures guanylation activity was developed in order to evaluate hits from future drug screens. This platform provides an avenue for identification of potent nsP1 inhibitors, which would potentially provide compounds capable of treating disease caused by CHIKV infection.

Indexed as

Antiviral AgentsChikungunya FeverChikungunya virusEnzyme InhibitorsGuanosine TriphosphateHigh-Throughput Screening AssaysHumansMethyltransferasesNucleotidyltransferasesRNA CapsAntiviral AgentsEnzyme InhibitorsGuanosine TriphosphateguanylyltransferaseMethyltransferasesNucleotidyltransferasesRNA Caps

Identifiers

PMID27427769
PMCPMC4948833
OpenAlexW2484803637

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.