Evidence map›Paper›PMID 27425195›Full record

ArticleScientific reports2016

Additive reductions in zebrafish PRPS1 activity result in a spectrum of deficiencies modeling several human PRPS1-associated diseases.

Wuhong Pei, Lisha Xu, Gaurav K Varshney, Blake Carrington, Kevin Bishop, MaryPat Jones, Sunny C Huang, Jennifer Idol, Pamela R Pretorius, Alisha Beirl and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 34 citations in OpenAlex.

  1. Divergent evolution of the PRPS enzymes across the tree of life.bioRxiv : the preprint server for biology · 2026
    Article
  2. medRxiv : the preprint server for health sciences · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Modeling of Charcot-Marie-Tooth disease in zebrafish.Frontiers in molecular neuroscience · 2025
    Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. PRPS polymerization influences lens fiber organization in zebrafish.Developmental dynamics : an official publication of the American Association of Anatomists · 2020
    Article
  16. International journal of molecular sciences · 2020
    Review
  17. Neuromuscular disease modeling on a chip.Disease models & mechanisms · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Wuhong PeiTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
Lisha XuTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
Gaurav K VarshneyTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
Blake CarringtonTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
Kevin BishopTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
MaryPat JonesCancer Genetics and Comparative Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
Sunny C HuangTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
Jennifer IdolTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
Pamela R PretoriusDepartment of Biology, Hanover College, Hanover, IN, 47243, USA.
Alisha BeirlSection on Sensory Cell Development and Function, National Institute on Deafness and Other Communication Disorders, Bethesda, MD 20892, USA.
Lisa A SchimmentiDepartments of Otorhinolaryngology and Clinical Genomics, Mayo Clinic, Rochester, MN 55905, USA.
Katie S KindtSection on Sensory Cell Development and Function, National Institute on Deafness and Other Communication Disorders, Bethesda, MD 20892, USA.
Raman SoodTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
Shawn M BurgessTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD 20892, USA.
National Human Genome Research Institute · USNational Institute on Deafness and Other Communication Disorders · USCancer Genetics (United States) · USHanover College · USMayo Clinic · US

Funding

In vivo investigation of sensory hair cell function and developmentZIADC000085 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI KINDT, KATIE · 2014 to 2025
$21.4M
NHGRI/DIR Genomics CoreZICHG200346 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI CHANDRASEKHARAPPA, SETTARA · 2010 to 2025
$14.5M
Hearing regeneration in zebrafishZIAHG200386 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BURGESS, SHAWN M · 2012 to 2025
$12.5M
NHGRI/DIR Zebrafish CoreZICHG200351 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI SOOD, RAMAN · 2015 to 2025
$12.1M
MINNESOTA PAIN RESEARCH TRAINING PROGRAMT32DE007288 · NIDCR · UNIVERSITY OF MINNESOTA TWIN CITIES · PI HERZBERG, MARK C · 1996 to 2011
$8.8M
Minnesota Craniofacial Research Training ProgramT90DE022732 · NIDCR · UNIVERSITY OF MINNESOTA · PI MANSKY, KIM CARPENTER · 2012 to 2023
$4.9M
Developmental Eye DefectsR01EY019267 · NEI · UNIVERSITY OF MINNESOTA · PI SCHIMMENTI, LISA A · 2009 to 2012
$1.1M
Intramural NIH HHS ZIA HG200386NEI NIH HHS R01 EY019267NIDCR NIH HHS T32 DE007288NIDCR NIH HHS T90 DE022732
6 · The paper itself

Abstract

Phosphoribosyl pyrophosphate synthetase-1 (PRPS1) is a key enzyme in nucleotide biosynthesis, and mutations in PRPS1 are found in several human diseases including nonsyndromic sensorineural deafness, Charcot-Marie-Tooth disease-5, and Arts Syndrome. We utilized zebrafish as a model to confirm that mutations in PRPS1 result in phenotypic deficiencies in zebrafish similar to those in the associated human diseases. We found two paralogs in zebrafish, prps1a and prps1b and characterized each paralogous mutant individually as well as the double mutant fish. Zebrafish prps1a mutants and prps1a;prps1b double mutants showed similar morphological phenotypes with increasingly severe phenotypes as the number of mutant alleles increased. Phenotypes included smaller eyes and reduced hair cell numbers, consistent with the optic atrophy and hearing impairment observed in human patients. The double mutant also showed abnormal development of primary motor neurons, hair cell innervation, and reduced leukocytes, consistent with the neuropathy and recurrent infection of the human patients possessing the most severe reductions of PRPS1 activity. Further analyses indicated the phenotypes were associated with a prolonged cell cycle likely resulting from reduced nucleotide synthesis and energy production in the mutant embryos. We further demonstrated the phenotypes were caused by delays in the tissues most highly expressing the prps1 genes.

Indexed as

Adenosine TriphosphateAnimalsBrainEar, InnerEmbryo, NonmammalianEyeGene Expression Regulation, DevelopmentalHematopoiesisHumansLeukocytesModels, BiologicalMotor NeuronsMutationPhenotypePigmentationRibose-Phosphate PyrophosphokinaseAdenosine Triphosphateprps1a protein, zebrafishPRPS1 protein, humanRibose-Phosphate PyrophosphokinaseS-AdenosylmethionineZebrafish Proteins

Identifiers

PMID27425195
PMCPMC4947902
OpenAlexW2497813056

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.