Evidence map›Paper›PMID 27423699›Full record

ArticleJournal of biomedical informatics2016

User-centered design of multi-gene sequencing panel reports for clinicians.

Elizabeth Cutting, Meghan Banchero, Amber L Beitelshees, James J Cimino, Guilherme Del Fiol, Ayse P Gurses, Mark A Hoffman, Linda Jo Bone Jeng, Kensaku Kawamoto, Mark Kelemen and 5 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Journal of biomedical informatics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05562440 (The Perspective of Healthy Individuals on Breast Cancer Risk Prediction Report in The Indonesian Population), which is not on this map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05562440 nacompletednot on this mapstarted 2022, after this paper: background citation

The Perspective of Healthy Individuals on Breast Cancer Risk Prediction Report in The Indonesian Population (Perspektif Para Individu Sehat Terhadap Laporan Prediksi Risiko Kanker Payudara)

TypeinterventionalSponsorNalagenetics Pte LtdRan2022 to 2023Enrolled10ConditionsBreast CancerArmsFocus Group Discussion
3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. FHIR Lab Reports: using SMART on FHIR and CDS Hooks to increase the clinical utility of pharmacogenomic laboratory test results.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2020
    Article
  8. Implementing the VMC Specification to Reduce Ambiguity in Genomic Variant Representation.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2019
    Article
  9. Review
  10. Prototype of a Standards-Based EHR and Genetic Test Reporting Tool Coupled with HL7-Compliant Infobuttons.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2018
    Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 1 country.

Elizabeth CuttingProgram for Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, MD, United States.
Meghan BancheroProgram for Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, MD, United States.
Amber L BeitelsheesProgram for Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, MD, United States.
James J CiminoInformatics Institute, School of Medicine, University of Alabama at Birmingham, Birmingham, AL, United States.
Guilherme Del FiolDepartment of Biomedical Informatics, University of Utah, Salt Lake City, UT, United States.
Ayse P GursesDivision of Health Sciences Informatics, Johns Hopkins University School of Medicine, United States; Armstrong Institute for Patient Safety and Quality, Johns Hopkins University School of Medicine, United States; Anesthesiology and Critical Care Medicine, Johns Hopkins University School of Medicine, United States.
Mark A HoffmanUniversity of Missouri - Kansas City, Kansas City, MO, United States; Children's Mercy Hospital, Kansas City, MO, United States.
Linda Jo Bone JengProgram for Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, MD, United States; Departments of Medicine, Pathology and Pediatrics, University of Maryland School of Medicine, Baltimore, MD, United States.
Kensaku KawamotoDepartment of Biomedical Informatics, University of Utah, Salt Lake City, UT, United States.
Mark KelemenUniversity of Maryland Medical Center, Baltimore, MD, United States.
Harold Alan PincusColumbia University and New York-Presbyterian Hospital, New York, NY, United States.
Alan R ShuldinerProgram for Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, MD, United States.
Marc S WilliamsGenomic Medicine Institute, Geisinger Health System, Danville, PA, United States.
Toni I PollinProgram for Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, MD, United States.
Casey Lynnette OverbyProgram for Personalized and Genomic Medicine, University of Maryland School of Medicine, Baltimore, MD, United States; Division of Health Sciences Informatics, Johns Hopkins University School of Medicine, United States; Division of General Internal Medicine, Johns Hopkins University School of Medicine, United States. Electronic address: overby@jhu.edu.
University of Maryland, Baltimore · USUniversity of Utah · USChildren's Mercy Hospital · USGeisinger Health System · USJohns Hopkins University · USNewYork–Presbyterian Hospital · USUniversity of Alabama at Birmingham · US

Funding

Pharmacogenomics of Anti-platlet Intervention-2 (PAPI-2) StudyU01HL105198 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI SHULDINER, ALAN R. · 2010 to 2014
$13.6M
Geisinger eGenonic Medicine (GeM) ProgramU01HG006382 · NHGRI · GEISINGER CLINIC · PI CAREY, DAVID J., WILLIAMS, MARC S. · 2011 to 2014
$4.3M
Genomic Diagnosis and Individualized Therapy of Highly Penetrant Genetic Diabetes (Administrative Supplment)U01HG007775 · NHGRI · UNIVERSITY OF MARYLAND BALTIMORE · PI POLLIN, TONI I. · 2014 to 2018
$4.3M
Electronic Health Record-linked Decision Support for Communicating Genomic Data tR21HS023390 · AHRQ · UNIVERSITY OF MARYLAND BALTIMORE · PI TAYLOR, CASEY OVERBY · 2014 to 2015
$300k
AHRQ HHS R21 HS023390NHGRI NIH HHS U01 HG006382NHGRI NIH HHS U01 HG007775NHLBI NIH HHS U01 HL105198
6 · The paper itself

Abstract

The objective of this study was to develop a high-fidelity prototype for delivering multi-gene sequencing panel (GS) reports to clinicians that simulates the user experience of a final application. The delivery and use of GS reports can occur within complex and high-paced healthcare environments. We employ a user-centered software design approach in a focus group setting in order to facilitate gathering rich contextual information from a diverse group of stakeholders potentially impacted by the delivery of GS reports relevant to two precision medicine programs at the University of Maryland Medical Center. Responses from focus group sessions were transcribed, coded and analyzed by two team members. Notification mechanisms and information resources preferred by participants from our first phase of focus groups were incorporated into scenarios and the design of a software prototype for delivering GS reports. The goal of our second phase of focus group, to gain input on the prototype software design, was accomplished through conducting task walkthroughs with GS reporting scenarios. Preferences for notification, content and consultation from genetics specialists appeared to depend upon familiarity with scenarios for ordering and delivering GS reports. Despite familiarity with some aspects of the scenarios we proposed, many of our participants agreed that they would likely seek consultation from a genetics specialist after viewing the test reports. In addition, participants offered design and content recommendations. Findings illustrated a need to support customized notification approaches, user-specific information, and access to genetics specialists with GS reports. These design principles can be incorporated into software applications that deliver GS reports. Our user-centered approach to conduct this assessment and the specific input we received from clinicians may also be relevant to others working on similar projects.

Indexed as

Focus GroupsPrecision MedicineSequence Analysis, DNASoftwareSoftware DesignDelivery of Health CareHumansUser-Computer InterfaceGenomic medicineGenomic sequencingPrecision medicineTask walkthroughsUser experience research

Identifiers

PMID27423699
PMCPMC5106875
OpenAlexW2470436942

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.