Evidence map›Paper›PMID 27422623›Full record

ArticlePlant molecular biology2016

Novel thidiazuron-derived inhibitors of cytokinin oxidase/dehydrogenase.

Jaroslav Nisler, David Kopečný, Radka Končitíková, Marek Zatloukal, Václav Bazgier, Karel Berka, David Zalabák, Pierre Briozzo, Miroslav Strnad, Lukáš Spíchal

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In one paragraph

Article in Plant molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
8.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  5. Genomic Insights intoInternational journal of molecular sciences · 2025
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  15. Targeting Cytokinin Homeostasis in Rapid CyclingPlants (Basel, Switzerland) · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Role of Cytokinins in Senescence, Antioxidant Defence and Photosynthesis.International journal of molecular sciences · 2018
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Jaroslav NislerLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research (CRH), Institute of Experimental Botany AS CR, Palacký University, Šlechtitelů 27, 783 71, Olomouc, Czech Republic. jaroslav.nisler@gmail.com.
David KopečnýDepartment of Protein Biochemistry and Proteomics, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 27, 783 71, Olomouc, Czech Republic. david.kopecny@upol.cz.
Radka KončitíkováDepartment of Protein Biochemistry and Proteomics, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 27, 783 71, Olomouc, Czech Republic.
Marek ZatloukalLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research (CRH), Institute of Experimental Botany AS CR, Palacký University, Šlechtitelů 27, 783 71, Olomouc, Czech Republic.
Václav BazgierLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research (CRH), Institute of Experimental Botany AS CR, Palacký University, Šlechtitelů 27, 783 71, Olomouc, Czech Republic.
Karel BerkaDepartment of Physical Chemistry, Faculty of Science, Palacký University, 17. listopadu 1192/12, 771 46, Olomouc, Czech Republic.
David ZalabákDepartment of Molecular Biology, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 27, 783 71, Olomouc, Czech Republic.
Pierre BriozzoInstitut Jean-Pierre Bourgin, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France.
Miroslav StrnadLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research (CRH), Institute of Experimental Botany AS CR, Palacký University, Šlechtitelů 27, 783 71, Olomouc, Czech Republic.
Lukáš SpíchalLaboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research (CRH), Institute of Experimental Botany AS CR, Palacký University, Šlechtitelů 27, 783 71, Olomouc, Czech Republic.
Palacký University Olomouc · CZCzech Academy of Sciences, Institute of Experimental Botany · CZInstitut Jean-Pierre Bourgin · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageTwo new TDZ derivatives (HETDZ and 3FMTDZ) are very potent inhibitors of CKX and are promising candidates for in vivo studies. Cytokinin hormones regulate a wide range of essential processes in plants. Thidiazuron (N-phenyl-N'-1,2,3-thiadiazol-5-yl urea, TDZ), formerly registered as a cotton defoliant, is a well known inhibitor of cytokinin oxidase/dehydrogenase (CKX), an enzyme catalyzing the degradation of cytokinins. TDZ thus increases the lifetime of cytokinins and their effects in plants. We used in silico modeling to design, synthesize and characterize twenty new TDZ derivatives with improved inhibitory properties. Two compounds, namely 1-[1,2,3]thiadiazol-5-yl-3-(3-trifluoromethoxy-phenyl)urea (3FMTDZ) and 1-[2-(2-hydroxyethyl)phenyl]-3-(1,2,3-thiadiazol-5-yl)urea (HETDZ), displayed up to 15-fold lower IC 50 values compared with TDZ for AtCKX2 from Arabidopsis thaliana and ZmCKX1 and ZmCKX4a from Zea mays. Binding modes of 3FMTDZ and HETDZ were analyzed by X-ray crystallography. Crystal structure complexes, solved at 2.0 Å resolution, revealed that HETDZ and 3FMTDZ bound differently in the active site of ZmCKX4a: the thiadiazolyl ring of 3FMTDZ was positioned over the isoalloxazine ring of FAD, whereas that of HETDZ had the opposite orientation, pointing toward the entrance of the active site. The compounds were further tested for cytokinin activity in several cytokinin bioassays. We suggest that the combination of simple synthesis, lowered cytokinin activity, and enhanced inhibitory effects on CKX isoforms, makes 3FMTDZ and HETDZ suitable candidates for in vivo studies.

Indexed as

CytokininsEnzyme InhibitorsOxidoreductasesPhenylurea CompoundsThiadiazolescytokinin oxidaseCytokininsEnzyme InhibitorsOxidoreductasesPhenylurea CompoundsThiadiazolesthidiazuronCrystal structureCytokininCytokinin oxidase/dehydrogenaseMolecular dockingOrganic synthesisThidiazuron

Identifiers

PMID27422623
OpenAlexW2472927473

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.