Evidence map›Paper›PMID 27422057›Full record

ArticleStem cells (Dayton, Ohio)2017

Establishment of Reporter Lines for Detecting Fragile X Mental Retardation (FMR1) Gene Reactivation in Human Neural Cells.

Meng Li, Huashan Zhao, Gene E Ananiev, Michael T Musser, Kathryn H Ness, Dianne L Maglaque, Krishanu Saha, Anita Bhattacharyya, Xinyu Zhao

Open access · bronzeAbstract read
In one paragraph

Article in Stem cells (Dayton, Ohio), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Reporter Alleles in hiPSCs: Visual Cues on Development and Disease.International journal of molecular sciences · 2024
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
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  17. Article
  18. Next Generation Precision Medicine: CRISPR-mediated Genome Editing for the Treatment of Neurodegenerative Disorders.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2019
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Meng LiWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Huashan ZhaoWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Gene E AnanievSmall Molecule Screening Facility, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Michael T MusserWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Kathryn H NessWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Dianne L MaglaqueWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Krishanu SahaDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Anita BhattacharyyaWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Xinyu ZhaoWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.ORCID 0000-0002-5128-4424
University of Wisconsin–Madison · USUniversity of Wisconsin System · US

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI DAVIDSON, RICHARD J · 1985 to 2015
$25.2M
Translational Regulation of Adult Neural Stem CellsR01MH078972 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI ZHAO, XINYU · 2007 to 2016
$4.3M
Role of small RNAs in NeurogenesisR01MH080434 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI ZHAO, XINYU · 2007 to 2015
$2.9M
Analysis of human trisomy 21 interneuron progenitorsR21HD085288 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI BHATTACHARYYA, ANITA · 2015 to 2016
$418k
NICHD NIH HHS P30 HD003352NICHD NIH HHS R21 HD085288NIMH NIH HHS R01 MH078972NIMH NIH HHS R01 MH080434
6 · The paper itself

Abstract

Human patient-derived induced pluripotent stem cells (hiPSCs) provide unique opportunities for disease modeling and drug development. However, adapting hiPSCs or their differentiated progenies to high throughput assays for phenotyping or drug screening has been challenging. Fragile X syndrome (FXS) is the most common inherited cause of intellectual disability and a major genetic cause of autism. FXS is caused by mutational trinucleotide expansion in the FMR1 gene leading to hypermethylation and gene silencing. One potential therapeutic strategy is to reactivate the silenced FMR1 gene, which has been attempted using both candidate chemicals and cell-based screening. However, molecules that effectively reactivate the silenced FMR1 gene are yet to be identified; therefore, a high throughput unbiased screen is needed. Here we demonstrate the creation of a robust FMR1-Nluc reporter hiPSC line by knocking in a Nano luciferase (Nluc) gene into the endogenous human FMR1 gene using the CRISPR/Cas9 genome editing method. We confirmed that luciferase activities faithfully report FMR1 gene expression levels and showed that neural progenitor cells derived from this line could be optimized for high throughput screening. The FMR1-Nluc reporter line is a good resource for drug screening as well as for testing potential genetic reactivation strategies. In addition, our data provide valuable information for the generation of knockin human iPSC reporter lines for disease modeling, drug screening, and mechanistic studies. Stem Cells 2017;35:158-169.

Indexed as

Genes, ReporterTranscriptional ActivationAzacitidineCell DifferentiationCell LineFragile X Messenger Ribonucleoprotein 1HumansLuciferasesNanoparticlesNeural Stem CellsNeuronsPluripotent Stem CellsSmall Molecule LibrariesAzacitidineFragile X Messenger Ribonucleoprotein 1LuciferasesSmall Molecule LibrariesDrug discoveryFMR1FMRPFragile X syndromeHigh throughputInduced pluripotent stem cellsLuciferase

Identifiers

PMID27422057
PMCPMC5195860
OpenAlexW2476062224

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.