Evidence map›Paper›PMID 27420056›Full record

ArticleInternational journal of molecular sciences2016

Interspecies and Intraspecies Analysis of Trehalose Contents and the Biosynthesis Pathway Gene Family Reveals Crucial Roles of Trehalose in Osmotic-Stress Tolerance in Cassava.

Bingying Han, Lili Fu, Dan Zhang, Xiuquan He, Qiang Chen, Ming Peng, Jiaming Zhang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 93 citations in OpenAlex.

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  15. Ectopic Expression ofInternational journal of molecular sciences · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Bingying HanInstitute of Tropical Bioscience and Biotechnology, Key Laboratory of Tropical Crops Biology and Genetic Resources, Ministry of Agriculture, Hainan Bioenergy Center, Chinese Academy of Tropical Agricultural Sciences (CATAS), Xueyuan Road 4, Haikou 571101, China. hanbingying@itbb.org.cn.
Lili FuInstitute of Tropical Bioscience and Biotechnology, Key Laboratory of Tropical Crops Biology and Genetic Resources, Ministry of Agriculture, Hainan Bioenergy Center, Chinese Academy of Tropical Agricultural Sciences (CATAS), Xueyuan Road 4, Haikou 571101, China. fulili@itbb.org.cn.
Dan ZhangInstitute of Tropical Bioscience and Biotechnology, Key Laboratory of Tropical Crops Biology and Genetic Resources, Ministry of Agriculture, Hainan Bioenergy Center, Chinese Academy of Tropical Agricultural Sciences (CATAS), Xueyuan Road 4, Haikou 571101, China. 18777350551@163.com.
Xiuquan HeInstitute of Tropical Bioscience and Biotechnology, Key Laboratory of Tropical Crops Biology and Genetic Resources, Ministry of Agriculture, Hainan Bioenergy Center, Chinese Academy of Tropical Agricultural Sciences (CATAS), Xueyuan Road 4, Haikou 571101, China. xiuquan.he@163.com.
Qiang ChenInstitute of Tropical Bioscience and Biotechnology, Key Laboratory of Tropical Crops Biology and Genetic Resources, Ministry of Agriculture, Hainan Bioenergy Center, Chinese Academy of Tropical Agricultural Sciences (CATAS), Xueyuan Road 4, Haikou 571101, China. 13666906069@163.com.
Ming PengInstitute of Tropical Bioscience and Biotechnology, Key Laboratory of Tropical Crops Biology and Genetic Resources, Ministry of Agriculture, Hainan Bioenergy Center, Chinese Academy of Tropical Agricultural Sciences (CATAS), Xueyuan Road 4, Haikou 571101, China. pengming@itbb.org.cn.
Jiaming ZhangInstitute of Tropical Bioscience and Biotechnology, Key Laboratory of Tropical Crops Biology and Genetic Resources, Ministry of Agriculture, Hainan Bioenergy Center, Chinese Academy of Tropical Agricultural Sciences (CATAS), Xueyuan Road 4, Haikou 571101, China. zhangjiaming@itbb.org.cn.
Chinese Academy of Tropical Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trehalose is a nonreducing α,α-1,1-disaccharide in a wide range of organisms, and has diverse biological functions that range from serving as an energy source to acting as a protective/signal sugar. However, significant amounts of trehalose have rarely been detected in higher plants, and the function of trehalose in the drought-tolerant crop cassava (Manihot esculenta Crantz) is unclear. We measured soluble sugar concentrations of nine plant species with differing levels of drought tolerance and 41 cassava varieties using high-performance liquid chromatography with evaporative light-scattering detector (HPLC-ELSD). Significantly high amounts of trehalose were identified in drought-tolerant crops cassava, Jatropha curcas, and castor bean (Ricinus communis). All cassava varieties tested contained high amounts of trehalose, although their concentrations varied from 0.23 to 1.29 mg·g(-1) fresh weight (FW), and the trehalose level was highly correlated with dehydration stress tolerance of detached leaves of the varieties. Moreover, the trehalose concentrations in cassava leaves increased 2.3-5.5 folds in response to osmotic stress simulated by 20% PEG 6000. Through database mining, 24 trehalose pathway genes, including 12 trehalose-6-phosphate synthases (TPS), 10 trehalose-6-phosphate phosphatases (TPP), and two trehalases were identified in cassava. Phylogenetic analysis indicated that there were four cassava TPS genes (MeTPS1-4) that were orthologous to the solely active TPS gene (AtTPS1 and OsTPS1) in Arabidopsis and rice, and a new TPP subfamily was identified in cassava, suggesting that the trehalose biosynthesis activities in cassava had potentially been enhanced in evolutionary history. RNA-seq analysis indicated that MeTPS1 was expressed at constitutionally high level before and after osmotic stress, while other trehalose pathway genes were either up-regulated or down-regulated, which may explain why cassava accumulated high level of trehalose under normal conditions. MeTPS1 was then transformed into tobacco (Nicotiana benthamiana). Results indicated that transgenic tobacco lines accumulated significant level of trehalose and possessed improved drought stress tolerance. In conclusion, cassava accumulated significantly high amount of trehalose under normal conditions due to multiplied trehalose biosynthesis gene families and constant expression of the active MeTPS1 gene. High levels of trehalose subsequently contributed to high drought stress tolerance.

Indexed as

Osmotic PressureStress, PhysiologicalBiosynthetic PathwaysGene Expression Regulation, PlantGlucosyltransferasesHigh-Throughput Nucleotide SequencingManihotPhylogenyPlant ProteinsPolyethylene GlycolsPolymerase Chain ReactionTranscriptomeTrehaloseGlucosyltransferasesPlant ProteinsPolyethylene GlycolsTrehalosetrehalose-6-phosphate synthaseabiotic stressdrought toleranceHPLC-ELSDManihot esculentaphylogenetic analysisRNA-seqtrehalase

Identifiers

PMID27420056
PMCPMC4964453
OpenAlexW2465977838

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.