Evidence map›Paper›PMID 27419845›Full record

ArticleRNA biology2016

Identification of processing elements and interactors implicate SMN, coilin and the pseudogene-encoded coilp1 in telomerase and box C/D scaRNP biogenesis.

Aaron R Poole, Isioma I Enwerem, Ian A Vicino, Jackson B Coole, Stanley V Smith, Michael D Hebert

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

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  7. Alteration of 28S rRNA 2'-Biology open · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Aaron R Poolea Department of Biochemistry , The University of Mississippi Medical Center , Jackson , MS , USA.
Isioma I Enwerema Department of Biochemistry , The University of Mississippi Medical Center , Jackson , MS , USA.
Ian A Vicinoa Department of Biochemistry , The University of Mississippi Medical Center , Jackson , MS , USA.
Jackson B Coolea Department of Biochemistry , The University of Mississippi Medical Center , Jackson , MS , USA.
Stanley V Smithb Department of Pharmacology and Toxicology , The University of Mississippi Medical Center , Jackson , MS , USA.
Michael D Heberta Department of Biochemistry , The University of Mississippi Medical Center , Jackson , MS , USA.
Jackson Memorial Hospital · USUniversity of Mississippi Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many cellular functions, such as translation, require ribonucleoproteins (RNPs). The biogenesis of RNPs is a multi-step process that, depending on the RNP, can take place in many cellular compartments. Here we examine 2 different RNPs: telomerase and small Cajal body-specific RNPs (scaRNPs). Both of these RNPs are enriched in the Cajal body (CB), which is a subnuclear domain that also has high concentrations of another RNP, small nuclear RNPs (snRNPs). SnRNPs are essential components of the spliceosome, and scaRNPs modify the snRNA component of the snRNP. The CB contains many proteins, including WRAP53, SMN and coilin, the CB marker protein. We show here that coilin, SMN and coilp1, a newly identified protein encoded by a pseudogene in human, associate with telomerase RNA and a subset of scaRNAs. We also have identified a processing element within box C/D scaRNA. Our findings thus further strengthen the connection between the CB proteins coilin and SMN in the biogenesis of telomeras e and box C/D scaRNPs, and reveal a new player, coilp1, that likely participates in this process.

Indexed as

AnimalsCoiled BodiesHeLa CellsHumansMiceNuclear ProteinsProtein BindingPseudogenesRibonucleoproteins, Small NuclearSurvival of Motor Neuron 1 ProteinTelomeraseNuclear Proteinsp80-coilinRibonucleoproteins, Small NuclearSMN1 protein, humanSurvival of Motor Neuron 1 ProteinTelomeraseCajal bodyCoilinpseudogenescaRNASMNtelomerase

Identifiers

PMID27419845
PMCPMC5056767
OpenAlexW2465246270

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.