Evidence map›Paper›PMID 27418670›Full record

ArticleHuman molecular genetics2016

Rescue of neural crest-derived phenotypes in a zebrafish CHARGE model by Sox10 downregulation.

Zainab Asad, Aditi Pandey, Aswini Babu, Yuhan Sun, Kaivalya Shevade, Shruti Kapoor, Ikram Ullah, Shashi Ranjan, Vinod Scaria, Ruchi Bajpai and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Zebrafish Congenital Heart Disease Models: Opportunities and Challenges.International journal of molecular sciences · 2024
    Review
  8. CHD7 regulates craniofacial cartilage development via controlling HTR2B expression.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2024
    Article
  9. Review
  10. Deletion of theInternational journal of molecular sciences · 2023
    Article
  11. Article
  12. Article
  13. Genes · 2023
    Article
  14. The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. Craniofacial and cardiac defects inFrontiers in cell and developmental biology · 2022
    Article
  16. Review
  17. CHD7 regulates cardiovascular development through ATP-dependent and -independent activities.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Article
  19. Congenital heart defects in CHARGE: The molecular role of CHD7 and effects on cardiac phenotype and clinical outcomes.American journal of medical genetics. Part C, Seminars in medical genetics · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Zainab AsadCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India.
Aditi PandeyCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India.
Aswini BabuCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India.
Yuhan SunCenter for Craniofacial Molecular Biology, Ostrow School of Dentistry and Department of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Kaivalya ShevadeCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India.
Shruti KapoorCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India.
Ikram UllahCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India.
Shashi RanjanCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India.
Vinod ScariaCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India.
Ruchi BajpaiCenter for Craniofacial Molecular Biology, Ostrow School of Dentistry and Department of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Chetana SachidanandanCSIR-Institute of Genomics & Integrative Biology, South Campus, New Delhi, 110025, India chetana@igib.in chetana@igib.res.in.
Institute of Genomics and Integrative Biology · INUniversity of Southern California · USAcademy of Scientific and Innovative Research · IN

Funding

EPIGENETIC CONTROL OF HUMAN NEURAL CREST FORMATION: IMPACT ON NEUROCRISTOPATHIESR01DE024584 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI SEGIL, NEIL · 2014 to 2018
$2.0M
NIDCR NIH HHS R01 DE024584
6 · The paper itself

Abstract

CHD7 mutations are implicated in a majority of cases of the congenital disorder, CHARGE syndrome. CHARGE, an autosomal dominant syndrome, is known to affect multiple tissues including eye, heart, ear, craniofacial nerves and skeleton and genital organs. Using a morpholino-antisense-oligonucleotide-based zebrafish model for CHARGE syndrome, we uncover a complex spectrum of abnormalities in the neural crest and the crest-derived cell types. We report for the first time, defects in myelinating Schwann cells, enteric neurons and pigment cells in a CHARGE model. We also observe defects in the specification of peripheral neurons and the craniofacial skeleton as previously reported. Chd7 morphants have impaired migration of neural crest cells and deregulation of sox10 expression from the early stages. Knocking down Sox10 in the zebrafish CHARGE model rescued the defects in Schwann cells and craniofacial cartilage. Our zebrafish CHARGE model thus reveals important regulatory roles for Chd7 at multiple points of neural crest development viz., migration, fate choice and differentiation and we suggest that sox10 deregulation is an important driver of the neural crest-derived aspects of Chd7 dependent CHARGE syndrome.

Indexed as

AnimalsCell DifferentiationCHARGE SyndromeDisease Models, AnimalDNA-Binding ProteinsDNA HelicasesGene Expression Regulation, DevelopmentalGene Knockdown TechniquesMorpholinosNeural CrestPhenotypeSchwann CellsSOXE Transcription FactorsZebrafishZebrafish ProteinsCHD7 protein, humanChd7 protein, zebrafishDNA-Binding ProteinsDNA HelicasesMorpholinossox10 protein, zebrafishSOXE Transcription FactorsZebrafish Proteins

Identifiers

PMID27418670
PMCPMC5179949
OpenAlexW2463097660

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.