Evidence map›Paper›PMID 27418370›Full record

ArticleSLAS technology2017

An Integrated Microfluidic SELEX Approach Using Combined Electrokinetic and Hydrodynamic Manipulation.

Timothy Olsen, Jing Zhu, Jinho Kim, Renjun Pei, Milan N Stojanovic, Qiao Lin

Abstract read
In one paragraph

Article in SLAS technology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. The Application of Microfluidic Technologies in Aptamer Selection.Frontiers in cell and developmental biology · 2021
    Review
  5. Review
  6. Review
  7. Review
  8. INTEGRATED MICROFLUIDIC SELEX USING FREE SOLUTION ELECTROKINETICS.Journal of the Electrochemical Society · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Timothy Olsen1 Department of Mechanical Engineering, Columbia University, New York, NY, USA.
Jing Zhu1 Department of Mechanical Engineering, Columbia University, New York, NY, USA.
Jinho Kim1 Department of Mechanical Engineering, Columbia University, New York, NY, USA.
Renjun Pei2 Suzhou Institute of Nano-Tech and Nano-Bionics, Chinese Academy of Sciences, Suzhou, China.
Milan N Stojanovic3 Department of Medicine, Columbia University, New York, NY, USA.
Qiao Lin1 Department of Mechanical Engineering, Columbia University, New York, NY, USA.

Funding

Clinical and Translational Science AwardUL1TR000040 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2012 to 2015
$26.2M
NRSA Training CoreTL1TR001875 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SPANN, MARISA N, TAYLOR, JACQUELYN Y · 2016 to 2025
$8.9M
Theranostic Nano-objects: Basic Principles and Initial ApplicationsR01GM104960 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI STOJANOVIC, MILAN N, YAN, HAO · 2012 to 2016
$5.4M
Validating Rapid Microfluidic Isolation of Personalized Aptamers for Monitoring Minimal Residual Disease in Multiple MyelomaR33CA196470 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI LIN, QIAO · 2016 to 2018
$1.2M
Clinical and Translational Science AwardTL1TR000082 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2012 to 2015
$732k
Automated Microfluidic Selection of Aptamers against CarbohydratesR21CA199849 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI STOJANOVIC, MILAN N · 2015 to 2016
$612k
Microfluidic Selection of Aptamers for Biological Purification ApplicationsR21GM104204 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI LIN, QIAO · 2012 to 2012
$196k
NCATS NIH HHS TL1 TR000082NCATS NIH HHS TL1 TR001875NCATS NIH HHS UL1 TR000040NCI NIH HHS R21 CA199849NCI NIH HHS R33 CA196470NIGMS NIH HHS R01 GM104960NIGMS NIH HHS R21 GM104204
6 · The paper itself

Abstract

This article presents a microfluidic approach for the integration of the process of aptamer selection via systematic evolution of ligands by exponential enrichment (SELEX). The approach employs bead-based biochemical reactions in which affinity-selected target-binding oligonucleotides are electrokinetically transferred for amplification, while the amplification product is transferred back for affinity selection via pressure-driven fluid flow. The hybrid approach simplifies the device design and operation procedures by reduced pressure-driven flow control requirements and avoids the potentially deleterious exposure of targets to electric fields prior to and during affinity selection. In addition, bead-based reactions are used to achieve the on-chip coupling of affinity selection and amplification of target-binding oligonucleotides, thereby realizing on-chip loop closure and integration of the entire SELEX process without requiring offline procedures. The microfluidic approach is thus capable of closed-loop, multiround aptamer enrichment as demonstrated by selection of DNA aptamers against the protein immunoglobulin E with high affinity ( K

Indexed as

HydrodynamicsLab-On-A-Chip DevicesElectrophoresisMicrofluidicsNucleic Acid Amplification TechniquesSELEX Aptamer Techniquelab-on-a-chipmicrofluidicsmolecular biologysystems

Identifiers

PMID27418370
PMCPMC5417355

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.