Evidence map›Paper›PMID 27418258›Full record

ArticleImmunogenetics2016

Characterisation of major histocompatibility complex class I genes in Japanese Ranidae frogs.

Quintin Lau, Takeshi Igawa, Shohei Komaki, Yoko Satta

Open access · hybridAbstract read
In one paragraph

Article in Immunogenetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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  7. TheAnimals : an open access journal from MDPI · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Quintin LauDepartment of Evolutionary Studies of Biosystems, Sokendai (The Graduate University for Advanced Studies), Kamiyamaguchi 1560-35, Hayama, Kanagawa, 240-0193, Japan. quintin@soken.ac.jp.
Takeshi IgawaGlobal Career Design Center, Hiroshima University, 1-7-1, Higashi-Hiroshima, Hiroshima, 739-8514, Japan.
Shohei KomakiDivision of Developmental Science, Graduate School for International Development and Cooperation, Hiroshima University, 1-5-1, Higashi-Hiroshima, Hiroshima, 739-8529, Japan.
Yoko SattaDepartment of Evolutionary Studies of Biosystems, Sokendai (The Graduate University for Advanced Studies), Kamiyamaguchi 1560-35, Hayama, Kanagawa, 240-0193, Japan.
Hiroshima University · JPThe Graduate University for Advanced Studies, SOKENDAI · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The major histocompatibility complex (MHC) is a key component of adaptive immunity in all jawed vertebrates, and understanding the evolutionary mechanisms that have shaped these genes in amphibians, one of the earliest terrestrial tetrapods, is important. We characterised MHC class I variation in three common Japanese Rana species (Rana japonica, Rana ornativentris and Rana tagoi tagoi) and identified a total of 60 variants from 21 individuals. We also found evolutionary signatures of gene duplication, recombination and balancing selection (including trans-species polymorphism), all of which drive increased MHC diversity. A unique feature of MHC class I from these three Ranidae species includes low synonymous differences per site (d

Indexed as

Biological EvolutionAmino Acid SequenceAnimalsGenetic VariationGenotypeHistocompatibility Antigens Class IPhylogenyRanidaeSelection, GeneticSequence Homology, Amino AcidHistocompatibility Antigens Class IAnuraMajor histocompatibility complexRanaSelection

Identifiers

PMID27418258
PMCPMC5056945
OpenAlexW2470717499

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.