Evidence map›Paper›PMID 27417392›Full record

ArticleNature communications2016

Identification of an ATP-controlled allosteric switch that controls actin filament nucleation by Arp2/3 complex.

Max Rodnick-Smith, Su-Ling Liu, Connor J Balzer, Qing Luan, Brad J Nolen

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.3field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
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  4. Molecular mechanism of Arp2/3 complex activation by nucleation-promoting factors and an actin monomer.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. The role of actin cytoskeleton component Arp2/3 in inflammatory response.Frontiers in cell and developmental biology · 2025
    Review
  7. Article
  8. Transition State of Arp2/3 Complex Activation by Actin-Bound Dimeric Nucleation-Promoting Factor.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Article
  11. Structure of Arp2/3 complex at a branched actin filament junction resolved by single-particle cryo-electron microscopy.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Max Rodnick-SmithInstitute of Molecular Biology and Department of Chemistry and Biochemistry, University of Oregon, Eugene, Oregon 97403, USA.ORCID 0000-0003-1744-9675
Su-Ling LiuInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403, USA.
Connor J BalzerInstitute of Molecular Biology and Department of Chemistry and Biochemistry, University of Oregon, Eugene, Oregon 97403, USA.
Qing LuanInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403, USA.
Brad J NolenInstitute of Molecular Biology and Department of Chemistry and Biochemistry, University of Oregon, Eugene, Oregon 97403, USA.
University of Oregon · US

Funding

MOLECULAR BIOLOGY AND BIOPHYSICST32GM007759 · NIGMS · UNIVERSITY OF OREGON · PI NOLEN, BRADLEY J · 1985 to 2021
$8.5M
Mechanisms of regulation of Arp2/3 complexR01GM092917 · NIGMS · UNIVERSITY OF OREGON · PI NOLEN, BRADLEY J · 2010 to 2018
$2.9M
NIGMS NIH HHS R01 GM092917NIGMS NIH HHS T32 GM007759
6 · The paper itself

Abstract

Nucleation of branched actin filaments by Arp2/3 complex is tightly regulated to control actin assembly in cells. Arp2/3 complex activation involves conformational changes brought about by ATP, Nucleation Promoting Factor (NPF) proteins, actin filaments and NPF-recruited actin monomers. To understand how these factors promote activation, we must first understand how the complex is held inactive in their absence. Here we demonstrate that the Arp3 C-terminal tail is a structural switch that prevents Arp2/3 complex from adopting an active conformation. The interaction between the tail and a hydrophobic groove in Arp3 blocks movement of Arp2 and Arp3 into an activated filament-like (short pitch) conformation. Our data indicate ATP binding destabilizes this interaction via an allosteric link between the Arp3 nucleotide cleft and the hydrophobic groove, thereby promoting the short-pitch conformation. Our results help explain how Arp2/3 complex is locked in an inactive state without activators and how autoinhibition is relieved.

Indexed as

Actin CytoskeletonActin-Related Protein 2Actin-Related Protein 2-3 ComplexActin-Related Protein 3Adenosine TriphosphateAmino Acid SequenceConserved SequenceProtein ConformationProtein MultimerizationProtein StabilitySaccharomyces cerevisiae ProteinsSchizosaccharomycesSchizosaccharomyces pombe ProteinsActin-Related Protein 2Actin-Related Protein 2-3 ComplexActin-Related Protein 3Adenosine TriphosphateARP2 protein, S cerevisiaeARP3 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe Proteins

Identifiers

PMID27417392
PMCPMC4947185
OpenAlexW2469836957

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.