Evidence map›Paper›PMID 27414641›Full record

ArticlePloS one2016

A Cytolethal Distending Toxin Variant from Aggregatibacter actinomycetemcomitans with an Aberrant CdtB That Lacks the Conserved Catalytic Histidine 160.

Davor Obradović, Rok Gašperšič, Simon Caserman, Adrijana Leonardi, Maja Jamnik, Zdravko Podlesek, Katja Seme, Gregor Anderluh, Igor Križaj, Peter Maček and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Functional Study ofToxins · 2020
    Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Davor ObradovićDepartment of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.
Rok GašperšičDepartment of Oral Medicine and Periodontology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia.
Simon CasermanLaboratory for Molecular Biology and Nanobiotechnology, National Institute of Chemistry, Ljubljana, Slovenia.
Adrijana LeonardiDepartment of Molecular and Biomedical Sciences, Jožef Stefan Institute, Ljubljana, Slovenia.
Maja JamnikLaboratory for Molecular Biology and Nanobiotechnology, National Institute of Chemistry, Ljubljana, Slovenia.
Zdravko PodlesekDepartment of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.
Katja SemeInstitute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia.
Gregor AnderluhLaboratory for Molecular Biology and Nanobiotechnology, National Institute of Chemistry, Ljubljana, Slovenia.
Igor KrižajDepartment of Molecular and Biomedical Sciences, Jožef Stefan Institute, Ljubljana, Slovenia.
Peter MačekDepartment of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.
Matej ButalaDepartment of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.
University of Ljubljana · SINational Institute of Chemistry · SIJožef Stefan Institute · SI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The periodontopathogen Aggregatibacter actinomycetemcomitans synthesizes several virulence factors, including cytolethal distending toxin (CDT). The active CDT holoenzyme is an AB-type tripartite genotoxin that affects eukaryotic cells. Subunits CdtA and CdtC (B-components) allow binding and intracellular translocation of the active CdtB (A-component), which elicits nuclear DNA damage. Different strains of A. actinomycetemcomitans have diverse virulence genotypes, which results in varied pathogenic potential and disease progression. Here, we identified an A. actinomycetemcomitans strain isolated from two patients with advance chronic periodontitis that has a regular cdtABC operon, which, however, codes for a unique, shorter, variant of the CdtB subunit. We describe the characteristics of this CdtBΔ116-188, which lacks the intact nuclear localisation signal and the catalytic histidine 160. We show that the A. actinomycetemcomitans DO15 isolate secretes CdtBΔ116-188, and that this subunit cannot form a holotoxin and is also not genotoxic if expressed ectopically in HeLa cells. Furthermore, the A. actinomycetemcomitans DO15 isolate is not toxic, nor does it induce cellular distention upon infection of co-cultivated HeLa cells. Biological significance of this deletion in the cdtB remains to be explained.

Indexed as

AdultAggregatibacter actinomycetemcomitansAmino Acid SequenceBacterial ToxinsChronic PeriodontitisConserved SequenceGenes, BacterialGenetic VariationHeLa CellsHistidineHumansJurkat CellsModels, MolecularOperonProtein ConformationSequence DeletionBacterial Toxinscytolethal distending toxinHistidine

Identifiers

PMID27414641
PMCPMC4945079
OpenAlexW2468990349

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.