Evidence map›Paper›PMID 27413183›Full record

ArticleThe Journal of biological chemistry2016

Contributions of the Lectin and Polypeptide Binding Sites of Calreticulin to Its Chaperone Functions in Vitro and in Cells.

Ronnie Lum, Samar Ahmad, Seo Jung Hong, Daniel C Chapman, Guennadi Kozlov, David B Williams

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Z-αScience advances · 2022
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Dissecting physical structure of calreticulin, an intrinsically disordered CaJournal of biomolecular structure & dynamics · 2018
    Article
  10. Biosynthesis of human myeloperoxidase.Archives of biochemistry and biophysics · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ronnie LumFrom the Departments of Biochemistry and Immunology, University of Toronto, Toronto, Ontario M5S 1A8, Canada and.
Samar AhmadFrom the Departments of Biochemistry and Immunology, University of Toronto, Toronto, Ontario M5S 1A8, Canada and.
Seo Jung HongFrom the Departments of Biochemistry and Immunology, University of Toronto, Toronto, Ontario M5S 1A8, Canada and.
Daniel C ChapmanFrom the Departments of Biochemistry and Immunology, University of Toronto, Toronto, Ontario M5S 1A8, Canada and.
Guennadi Kozlovthe Groupe de Recherche Axé sur la Structure des Proteines, Department of Biochemistry, McGill University, Montréal, Québec H3G 0B1, Canada.
David B WilliamsFrom the Departments of Biochemistry and Immunology, University of Toronto, Toronto, Ontario M5S 1A8, Canada and david.williams@utoronto.ca.
University of Toronto · CAMcGill University · CA

Funding

CIHR MOP123226
6 · The paper itself

Abstract

Calreticulin is a lectin chaperone of the endoplasmic reticulum that interacts with newly synthesized glycoproteins by binding to Glc1Man9GlcNAc2 oligosaccharides as well as to the polypeptide chain. In vitro, the latter interaction potently suppresses the aggregation of various non-glycosylated proteins. Although the lectin-oligosaccharide association is well understood, the polypeptide-based interaction is more controversial because the binding site on calreticulin has not been identified, and its significance in the biogenesis of glycoproteins in cells remains unknown. In this study, we identified the polypeptide binding site responsible for the in vitro aggregation suppression function by mutating four candidate hydrophobic surface patches. Mutations in only one patch, P19K/I21E and Y22K/F84E, impaired the ability of calreticulin to suppress the thermally induced aggregation of non-glycosylated firefly luciferase. These mutants also failed to bind several hydrophobic peptides that act as substrate mimetics and compete in the luciferase aggregation suppression assay. To assess the relative contributions of the glycan-dependent and -independent interactions in living cells, we expressed lectin-deficient, polypeptide binding-deficient, and doubly deficient calreticulin constructs in calreticulin-negative cells and monitored the effects on the biogenesis of MHC class I molecules, the solubility of mutant forms of α1-antitrypsin, and interactions with newly synthesized glycoproteins. In all cases, we observed a profound impairment in calreticulin function when its lectin site was inactivated. Remarkably, inactivation of the polypeptide binding site had little impact. These findings indicate that the lectin-based mode of client interaction is the predominant contributor to the chaperone functions of calreticulin within the endoplasmic reticulum.

Indexed as

alpha 1-AntitrypsinAmino Acid SubstitutionAnimalsBinding SitesCalreticulinCell LineFibroblastsHistocompatibility Antigens Class IMiceMolecular ChaperonesMutation, Missensealpha 1-AntitrypsinCalreticulinHistocompatibility Antigens Class IMolecular Chaperonesendoplasmic reticulum (ER)lectinmolecular chaperoneprotein aggregationprotein folding

Identifiers

PMID27413183
PMCPMC5016696
OpenAlexW2472644326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.