Evidence map›Paper›PMID 27412864›Full record

ArticleEvolution, medicine, and public health2016

Vancomycin gene selection in the microbiome of urban Rattus norvegicus from hospital environment.

Thomas Arn Hansen, Tejal Joshi, Anders Rhod Larsen, Paal Skytt Andersen, Klaus Harms, Sarah Mollerup, Eske Willerslev, Kurt Fuursted, Lars Peter Nielsen, Anders Johannes Hansen

Open access · goldAbstract read
In one paragraph

Article in Evolution, medicine, and public health, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Wildlife and Antibiotic Resistance.Frontiers in cellular and infection microbiology · 2022
    Review
  4. Prevalence of Extended-SpectrumVeterinary medicine international · 2020
    Article
  5. Urban brown rats (Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2019
    Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Thomas Arn HansenCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, DK-1350, Denmark;
Tejal JoshiCenter for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Kemitorvet, 2800, Kgs, Lyngby, Denmark;
Anders Rhod LarsenDepartment of Microbiology & Infection Control, Statens Serum Institut;
Paal Skytt AndersenDepartment of Microbiology & Infection Control, Statens Serum Institut;
Klaus HarmsCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, DK-1350, Denmark;
Sarah MollerupCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, DK-1350, Denmark;
Eske WillerslevCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, DK-1350, Denmark;
Kurt FuurstedDepartment of Microbiology & Infection Control, Statens Serum Institut;
Lars Peter NielsenDepartment of Autoimmunology and Biomarkers, Statens Serum Institut, Copenhagen S, DK-2300, Denmark.
Anders Johannes HansenCentre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, DK-1350, Denmark; ajhansen@snm.ku.dk.
Statens Serum Institut · DKUniversity of Copenhagen · DKNatural History Museum Aarhus · DKTechnical University of Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

objectivesWidespread use of antibiotics has resulted in selection pressure on genes that make bacteria non-responsive to antibiotics. These antibiotic-resistant bacteria are currently a major threat to global health. There are various possibilities for the transfer of antibiotic resistance genes. It has been argued that animal vectors such as Rattus norvegicus (R. norvegicus) living in hospital sewage systems are ideal for carrying pathogens responsible for fatal diseases in humans. METHODOLOGY: Using a metagenomic sequencing approach, we investigated faecal samples of R. norvegicus from three major cities for the presence of antibiotic resistance genes.

resultsWe show that despite the shared resistome within samples from the same geographic locations, samples from hospital area carry significantly abundant vancomycin resistance genes. CONCLUSIONS AND IMPLICATIONS: The observed pattern is consistent with a selection for vancomycin genes in the R. norvegicus microbiome, potentially driven by the outflow of antibiotics and antibiotic-resistant bacteria into the wastewater systems. Carriage of vancomycin resistance may suggest that R. norvegicus is acting as a reservoir for possible transmission to the human population.

Indexed as

antibioticsmetagenomicsratsRattusselectionvanbvancomycinwild

Identifiers

PMID27412864
PMCPMC4972940
OpenAlexW2463131645

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.