Evidence map›Paper›PMID 27412403›Full record

ArticleNature communications2016

Critical role of RanBP2-mediated SUMOylation of Small Heterodimer Partner in maintaining bile acid homeostasis.

Dong-Hyun Kim, Sanghoon Kwon, Sangwon Byun, Zhen Xiao, Sean Park, Shwu-Yuan Wu, Cheng-Ming Chiang, Byron Kemper, Jongsook Kim Kemper

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Dong-Hyun KimDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Sanghoon KwonDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Sangwon ByunDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Zhen XiaoLaboratory of Proteomics and Analytical Technologies, Advanced Technology Program, SAIC-Frederick, Inc., Frederick National Laboratory for Cancer Research, Frederick, Maryland 21702, USA.
Sean ParkDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Shwu-Yuan WuSimmons Comprehensive Cancer Center, Department of Biochemistry, and Department of Pharmacology, University of Texas, Southwestern Medical Center, Dallas, Texas 75390, USA.
Cheng-Ming ChiangSimmons Comprehensive Cancer Center, Department of Biochemistry, and Department of Pharmacology, University of Texas, Southwestern Medical Center, Dallas, Texas 75390, USA.
Byron KemperDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Jongsook Kim KemperDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
University of Illinois Urbana-Champaign · USThe University of Texas Southwestern Medical Center · USFrederick National Laboratory for Cancer Research · US

Funding

Regulation of Cholesterol Catabolism by Bile AcidsR01DK062777 · NIDDK · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI KEMPER, JONGSOOK KIM · 2003 to 2021
$5.8M
E2-Cellular Complexes in HPV Chromatin TranscriptionR01CA103867 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI CHIANG, CHENG-MING · 2004 to 2017
$4.0M
Coordination of gut-liver bile acid signaling by FXRR01DK095842 · NIDDK · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KEMPER, JONGSOOK KIM · 2012 to 2021
$3.0M
Regulation of cholesterol catabolism by bile acidsR56DK062777 · NIDDK · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KEMPER, JONGSOOK KIM · 2008 to 2008
$192k
NCI NIH HHS R01 CA103867NIDDK NIH HHS R01 DK062777NIDDK NIH HHS R01 DK095842NIDDK NIH HHS R56 DK062777
6 · The paper itself

Abstract

Bile acids (BAs) are recently recognized signalling molecules that profoundly affect metabolism. Because of detergent-like toxicity, BA levels must be tightly regulated. An orphan nuclear receptor, Small Heterodimer Partner (SHP), plays a key role in this regulation, but how SHP senses the BA signal for feedback transcriptional responses is not clearly understood. We show an unexpected function of a nucleoporin, RanBP2, in maintaining BA homoeostasis through SUMOylation of SHP. Upon BA signalling, RanBP2 co-localizes with SHP at the nuclear envelope region and mediates SUMO2 modification at K68, which facilitates nuclear transport of SHP and its interaction with repressive histone modifiers to inhibit BA synthetic genes. Mice expressing a SUMO-defective K68R SHP mutant have increased liver BA levels, and upon BA- or drug-induced biliary insults, these mice exhibit exacerbated cholestatic pathologies. These results demonstrate a function of RanBP2-mediated SUMOylation of SHP in maintaining BA homoeostasis and protecting from the BA hepatotoxicity.

Indexed as

HomeostasisSumoylationAmino Acid SequenceAnimalsBile Acids and SaltsCell NucleusCholestasisDisease ProgressionDown-RegulationEpigenesis, GeneticHep G2 CellsHumansLiverLysineMaleMice, Inbred BALB CBile Acids and SaltsLysineMolecular ChaperonesNuclear Pore Complex Proteinsnuclear receptor subfamily 0, group B, member 2Phosphothreonineran-binding protein 2Receptors, Cytoplasmic and NuclearSmall Ubiquitin-Related Modifier Proteins

Identifiers

PMID27412403
PMCPMC4947186
OpenAlexW2464512444

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.