ArticleBioinformatics (Oxford, England)2016
MSAViewer: interactive JavaScript visualization of multiple sequence alignments.
Article in Bioinformatics (Oxford, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
97 citing papers in PubMed.
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- 3-D substructure search by transitive closure in AlphaFold database.Protein science : a publication of the Protein Society · 2025Article
- Characterization of germinant receptors ofCurrent research in microbial sciences · 2025Article
- Mechanisms of recalcitrant fucoidan breakdown in marine Planctomycetota.Nature communications · 2024Article
- Visualizing metagenomic and metatranscriptomic data: A comprehensive review.Computational and structural biotechnology journal · 2024Review
- Aldo-keto reductase (AKR) superfamily website and database: An update.Chemico-biological interactions · 2024Article
- NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes.Nucleic acids research · 2024Article
- RVdb: a comprehensive resource and analysis platform for rhinovirus research.Nucleic acids research · 2024Article
- A layout framework for genome-wide multiple sequence alignment graphs.Frontiers in bioinformatics · 2024Article
- SnakeLines: integrated set of computational pipelines for sequencing reads.Journal of integrative bioinformatics · 2023Article
- Pipeline for transferring annotations between proteins beyond globular domains.Protein science : a publication of the Protein Society · 2023Article
- NLRscape: an atlas of plant NLR proteins.Nucleic acids research · 2023Article
- UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi.Nucleic acids research · 2023Article
- Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR.Nucleic acids research · 2023Article
- OpenGenomeBrowser: a versatile, dataset-independent and scalable web platform for genome data management and comparative genomics.BMC genomics · 2022Article
- PanExplorer: a web-based tool for exploratory analysis and visualization of bacterial pan-genomes.Bioinformatics (Oxford, England) · 2022Article
- GGDB: A Grameneae genome alignment database of homologous genes hierarchically related to evolutionary events.Plant physiology · 2022Article
37 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors.
Funding
Abstract
The MSAViewer is a quick and easy visualization and analysis JavaScript component for Multiple Sequence Alignment data of any size. Core features include interactive navigation through the alignment, application of popular color schemes, sorting, selecting and filtering. The MSAViewer is 'web ready': written entirely in JavaScript, compatible with modern web browsers and does not require any specialized software. The MSAViewer is part of the BioJS collection of components. AVAILABILITY AND IMPLEMENTATION: The MSAViewer is released as open source software under the Boost Software License 1.0. Documentation, source code and the viewer are available at http://msa.biojs.net/Supplementary information: Supplementary data are available at Bioinformatics online. CONTACT: msa@bio.sh.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.