Evidence map›Paper›PMID 27411639›Full record

ArticleScientific reports2016

Serotype IV Streptococcus agalactiae ST-452 has arisen from large genomic recombination events between CC23 and the hypervirulent CC17 lineages.

Edmondo Campisi, C Daniela Rinaudo, Claudio Donati, Mara Barucco, Giulia Torricelli, Morven S Edwards, Carol J Baker, Imma Margarit, Roberto Rosini

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 27 citations in OpenAlex.

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  9. Streptococcus agalactiae strains isolated from cancer patients in Rio de Janeiro, Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
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  13. Surface Structures of Group BMicrobiology spectrum · 2019
    Review
  14. Review
  15. Article
  16. Subspecies Typing ofFrontiers in microbiology · 2019
    Article
  17. Review
  18. Review
  19. Pathogenicity of Human ST23Frontiers in microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Edmondo CampisiGSK Vaccines s.r.l., Siena, Italy.
C Daniela RinaudoGSK Vaccines s.r.l., Siena, Italy.
Claudio DonatiDepartment of Computational Biology, Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige, Italy.
Mara BaruccoGSK Vaccines s.r.l., Siena, Italy.
Giulia TorricelliGSK Vaccines s.r.l., Siena, Italy.
Morven S EdwardsDepartment of Pediatrics, Baylor College of Medicine, Houston, Texas, USA.
Carol J BakerDepartment of Pediatrics, Baylor College of Medicine, Houston, Texas, USA.
Imma MargaritGSK Vaccines s.r.l., Siena, Italy.
Roberto RosiniGSK Vaccines s.r.l., Siena, Italy.
Baylor College of Medicine · USFondazione Edmund Mach · ITSapienza University of Rome · ITUniversity of Pisa · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Streptococcus agalactiae (Group B Streptococcus, GBS) causes life-threatening infections in newborns and adults with chronic medical conditions. Serotype IV strains are emerging both among carriers and as cause of invasive disease and recent studies revealed two main Sequence Types (STs), ST-452 and ST-459 assigned to Clonal Complexes CC23 and CC1, respectively. Whole genome sequencing of 70 type IV GBS and subsequent phylogenetic analysis elucidated the localization of type IV isolates in a SNP-based phylogenetic tree and suggested that ST-452 could have originated through genetic recombination. SNPs density analysis of the core genome confirmed that the founder strain of this lineage originated from a single large horizontal gene transfer event between CC23 and the hypervirulent CC17. Indeed, ST-452 genomes are composed by two parts that are nearly identical to corresponding regions in ST-24 (CC23) and ST-291 (CC17). Chromosome mapping of the major GBS virulence factors showed that ST-452 strains have an intermediate yet unique profile among CC23 and CC17 strains. We described unreported large recombination events, involving the cps IV operon and resulting in the expansion of serotype IV to CC23. This work sheds further light on the evolution of GBS providing new insights on the recent emergence of serotype IV.

Indexed as

AdultDNA, BacterialGenome, BacterialGenomicsHumansInfant, NewbornPhylogenyPolymorphism, Single NucleotideRecombination, GeneticSerotypingSpecies SpecificityStreptococcal InfectionsStreptococcus agalactiaeVirulenceWhole Genome SequencingDNA, Bacterial

Identifiers

PMID27411639
PMCPMC4944191
OpenAlexW2465435308

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.