Evidence map›Paper›PMID 27410475›Full record

ArticleeLife2016

Wiz binds active promoters and CTCF-binding sites and is required for normal behaviour in the mouse.

Luke Isbel, Lexie Prokopuk, Haoyu Wu, Lucia Daxinger, Harald Oey, Alex Spurling, Adam J Lawther, Matthew W Hale, Emma Whitelaw

Open access · goldAbstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
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  13. Loss of the neural-specific BAF subunit ACTL6B relieves repression of early response genes and causes recessive autism.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Luke IsbelDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, Melbourne, Australia.ORCID 0000-0002-5270-4347
Lexie ProkopukDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, Melbourne, Australia.
Haoyu WuDepartment of Human Genetics, Leiden University Medical Centre, Leiden, The Netherlands.
Lucia DaxingerDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, Melbourne, Australia.
Harald OeyDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, Melbourne, Australia.
Alex SpurlingDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, Melbourne, Australia.ORCID 0000-0002-4368-6191
Adam J LawtherDepartment of Psychology and Counselling, La Trobe University, Melbourne, Australia.
Matthew W HaleDepartment of Psychology and Counselling, La Trobe University, Melbourne, Australia.
Emma WhitelawDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, Melbourne, Australia.ORCID 0000-0002-2320-2903
La Trobe University · AULeiden University · NLTranslational Research Institute · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We previously identified Wiz in a mouse screen for epigenetic modifiers. Due to its known association with G9a/GLP, Wiz is generally considered a transcriptional repressor. Here, we provide evidence that it may also function as a transcriptional activator. Wiz levels are high in the brain, but its function and direct targets are unknown. ChIP-seq was performed in adult cerebellum and Wiz peaks were found at promoters and transcription factor CTCF binding sites. RNA-seq in Wiz mutant mice identified genes differentially regulated in adult cerebellum and embryonic brain. In embryonic brain most decreased in expression and included clustered protocadherin genes. These also decreased in adult cerebellum and showed strong Wiz ChIP-seq enrichment. Because a precise pattern of protocadherin gene expression is required for neuronal development, behavioural tests were carried out on mutant mice, revealing an anxiety-like phenotype. This is the first evidence of a role for Wiz in neural function.

Indexed as

Behavior, AnimalGene Expression RegulationPromoter Regions, GeneticAnimalsBinding SitesCCCTC-Binding FactorCerebellumChromatin ImmunoprecipitationGene Knockout TechniquesKruppel-Like Transcription FactorsMiceMice, KnockoutNerve Tissue ProteinsProtein BindingSequence Analysis, DNACCCTC-Binding FactorCtcf protein, mouseKruppel-Like Transcription FactorsNerve Tissue ProteinsWiz protein, mousechromosomesepigeneticsgenesmommemousewidely interspaced zinc finger motifs

Identifiers

PMID27410475
PMCPMC4977153
OpenAlexW2460062293

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.