Evidence map›Paper›PMID 27409661›Full record

ArticleMicrobial drug resistance (Larchmont, N.Y.)2016

Promoter Identification and Transcription Analysis of Penicillin-Binding Protein Genes in Streptococcus pneumoniae R6.

Katharina Peters, Julia Pipo, Inga Schweizer, Regine Hakenbeck, Dalia Denapaite

Open access · hybridAbstract read
In one paragraph

Article in Microbial drug resistance (Larchmont, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Katharina PetersDepartment of Microbiology, University of Kaiserslautern , Kaiserslautern, Germany .
Julia PipoDepartment of Microbiology, University of Kaiserslautern , Kaiserslautern, Germany .
Inga SchweizerDepartment of Microbiology, University of Kaiserslautern , Kaiserslautern, Germany .
Regine HakenbeckDepartment of Microbiology, University of Kaiserslautern , Kaiserslautern, Germany .
Dalia DenapaiteDepartment of Microbiology, University of Kaiserslautern , Kaiserslautern, Germany .
University of Kaiserslautern · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Penicillin-binding proteins (PBPs) are membrane-associated enzymes, which are involved in the last two steps of peptidoglycan biosynthesis, and some of them are key players in cell division. Furthermore, they are targets of β-lactams, the most widely used antibiotics. Nevertheless, very little is known about the expression and regulation of PBP genes. Using transcriptional mapping, we now determined the promoter regions of PBP genes from the laboratory strain Streptococcus pneumoniae R6 and examined the expression profile of these six promoters. The extended -10 region is highly conserved and complies with a σ(A)-type promoter consensus sequence. In contrast, the -35 region is poorly conserved, indicating the possibility for differential PBP regulation. All PBP promoters were constitutively expressed and highly active during the exponential and early stationary growth phase. However, the individual expression of PBP promoters varied approximately fourfold, with pbp1a being the highest and pbp3 the lowest. Furthermore, the deletion of one nucleotide in the spacer region of the PBP3 promoter reduced pbp3 expression ∼10-fold. The addition of cefotaxime above the minimal inhibitory concentration (MIC) did not affect PBP expression in the penicillin-sensitive R6 strain. No evidence for regulation of S. pneumoniae PBP genes was obtained.

Indexed as

Gene Expression Regulation, BacterialPromoter Regions, GeneticTranscription, GeneticAnti-Bacterial AgentsBase SequenceCefotaximeConserved SequenceMicrobial Sensitivity TestsMutationPenicillin-Binding ProteinsPenicillin ResistancePenicillinsProtein IsoformsSequence AlignmentStreptococcus pneumoniaeAnti-Bacterial AgentsCefotaximePenicillin-Binding ProteinsPenicillinsProtein Isoforms

Identifiers

PMID27409661
PMCPMC5036317
OpenAlexW2514079901

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.