Evidence map›Paper›PMID 27407113›Full record

ArticleNucleic acids research2016

S6K2-mediated regulation of TRBP as a determinant of miRNA expression in human primary lymphatic endothelial cells.

Matthew J Warner, Katherine S Bridge, James P Hewitson, Michael R Hodgkinson, Alex Heyam, Bailey C Massa, Jessica C Haslam, Maria Chatzifrangkeskou, Gareth J O Evans, Michael J Plevin and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Loss of TSC complex enhances gluconeogenesis via upregulation ofProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  7. Review
  8. MicroRNAs: From Mechanism to Organism.Frontiers in cell and developmental biology · 2020
    Review
  9. Article
  10. Review
  11. MicroRNA regulation of vascular function.Vascular biology (Bristol, England) · 2019
    Review
  12. Review
  13. A biosensor for MAPK-dependent Lin28 signaling.Molecular biology of the cell · 2018
    Article
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Matthew J WarnerCentre for Immunology and Infection, Department of Biology and Hull York Medical School, University of York, Wentworth Way, York, YO10 5DD, UK.
Katherine S BridgeCentre of Molecular Oncology, Barts Cancer Institute, John Vane Science Centre, Charterhouse Square, Queen Mary University London, London, EC1M 6BQ, UK.
James P HewitsonCentre for Immunology and Infection, Department of Biology and Hull York Medical School, University of York, Wentworth Way, York, YO10 5DD, UK.
Michael R HodgkinsonDepartment of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
Alex HeyamDepartment of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
Bailey C MassaCentre for Immunology and Infection, Department of Biology and Hull York Medical School, University of York, Wentworth Way, York, YO10 5DD, UK.
Jessica C HaslamCentre for Immunology and Infection, Department of Biology and Hull York Medical School, University of York, Wentworth Way, York, YO10 5DD, UK.
Maria ChatzifrangkeskouCentre for Immunology and Infection, Department of Biology and Hull York Medical School, University of York, Wentworth Way, York, YO10 5DD, UK.
Gareth J O EvansDepartment of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
Michael J PlevinDepartment of Biology, University of York, Wentworth Way, York, YO10 5DD, UK.
Tyson V SharpCentre of Molecular Oncology, Barts Cancer Institute, John Vane Science Centre, Charterhouse Square, Queen Mary University London, London, EC1M 6BQ, UK.
Dimitris LagosCentre for Immunology and Infection, Department of Biology and Hull York Medical School, University of York, Wentworth Way, York, YO10 5DD, UK dimitris.lagos@york.ac.uk.ORCID http://orcid.org/0000-0003-0637-281X
University of York · GBQueen Mary University of London · GB

Funding

Cancer Research UK 12733Medical Research Council MR/L008505/1Medical Research Council MR/N009185/1
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are short non-coding RNAs that silence mRNAs. They are generated following transcription and cleavage by the DROSHA/DGCR8 and DICER/TRBP/PACT complexes. Although it is known that components of the miRNA biogenesis machinery can be phosphorylated, it remains poorly understood how these events become engaged during physiological cellular activation. We demonstrate that S6 kinases can phosphorylate the extended C-terminal domain of TRBP and interact with TRBP in situ in primary cells. TRBP serines 283/286 are essential for S6K-mediated TRBP phosphorylation, optimal expression of TRBP, and the S6K-TRBP interaction in human primary cells. We demonstrate the functional relevance of this interaction in primary human dermal lymphatic endothelial cells (HDLECs). Angiopoietin-1 (ANG1) can augment miRNA biogenesis in HDLECs through enhancing TRBP phosphorylation and expression in an S6K2-dependent manner. We propose that the S6K2/TRBP node controls miRNA biogenesis in HDLECs and provides a molecular link between the mTOR pathway and the miRNA biogenesis machinery.

Indexed as

Gene Expression RegulationAngiopoietin-1Cell LineCells, CulturedEndothelial CellsHumansMicroRNAsPhosphorylationProtein Interaction Domains and MotifsRibosomal Protein S6 KinasesRNA-Binding ProteinsTrans-Activation Responsive RNA-Binding ProteinAngiopoietin-1MicroRNAsRibosomal Protein S6 KinasesRNA-Binding ProteinsTrans-Activation Responsive RNA-Binding Protein

Identifiers

PMID27407113
PMCPMC5175334
OpenAlexW2475323326

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.