Evidence map›Paper›PMID 27406890›Full record

ArticleScientific reports2016

Tunable switch mediated shikimate biosynthesis in an engineered non-auxotrophic Escherichia coli.

Pengfei Gu, Tianyuan Su, Qian Wang, Quanfeng Liang, Qingsheng Qi

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

  1. Metabolic engineering ofSynthetic and systems biotechnology · 2027
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Engineering a universal and efficient platform for terpenoid synthesis in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. EngineeredFrontiers in microbiology · 2023
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Pengfei GuState Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, People's Republic of China.
Tianyuan SuState Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, People's Republic of China.
Qian WangState Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, People's Republic of China.
Quanfeng LiangState Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, People's Republic of China.
Qingsheng QiState Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, People's Republic of China.
State Key Laboratory of Microbial TechnologyShandong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shikimate is a key intermediate in the synthesis of neuraminidase inhibitors. Compared with traditional methods, microbial production of shikimate has the advantages of environmental friendliness, low cost, feed stock renewability, and product selectivity and diversity. Despite these advantages, shikimate kinase I and II respectively encoded by aroK and aroL are inactivated in most shikimate microbial producers, thus requiring the addition of aromatic compounds during the fermentation process. To overcome this problem, we constructed a non-auxotrophic, shikimate-synthesising strain of Escherichia coli. By inactivation of repressor proteins, blocking of competitive pathways and overexpression of key enzymes, we increased the shikimate production of wild-type E. coli BW25113 to 1.73 g/L. We then designed a tunable switch that can conditionally decrease gene expression and substituted it for the original aroK promoters. Expression of aroK in the resulting P-9 strain was maintained at a high level during the growth phase and then reduced at a suitable time by addition of an optimal concentration of inducer. In 5-L fed-batch fermentation, strain P-9 produced 13.15 g/L shikimate without the addition of any aromatic compounds. The tunable switch developed in this study is an efficient tool for regulating indispensable genes involved in critical metabolic pathways.

Indexed as

Escherichia coliMetabolic EngineeringPhosphotransferases (Alcohol Group Acceptor)Shikimic AcidPhosphotransferases (Alcohol Group Acceptor)shikimate kinaseShikimic Acid

Identifiers

PMID27406890
PMCPMC4942831
OpenAlexW2464884339

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.