Evidence map›Paper›PMID 27406561›Full record

ArticlemBio2016

Lectin-Glycan Interaction Network-Based Identification of Host Receptors of Microbial Pathogenic Adhesins.

Francesco S Ielasi, Mitchel Alioscha-Perez, Dagmara Donohue, Sandra Claes, Hichem Sahli, Dominique Schols, Ronnie G Willaert

Open access · goldAbstract read
In one paragraph

Article in mBio, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Impairment of SK-MEL-28 Development-A Human Melanoma Cell Line-By theInternational journal of molecular sciences · 2023
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Shiga Toxin-ProducingMicroorganisms · 2022
    Review
  13. Review
  14. Article
  15. The Flo Adhesin Family.Pathogens (Basel, Switzerland) · 2021
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Francesco S IelasiDepartment of Bioengineering Sciences, Structural Biology Brussels, International Joint Research Group VUB-EPFL BioNanotechnology & NanoMedicine (NANO), Vrije Universiteit Brussel, Brussels, Belgium.
Mitchel Alioscha-PerezDepartment of Electronics and Informatics (ETRO), AVSP Lab, International Joint Research Group VUB-EPFL BioNanotechnology and NanoMedicine (NANO), Vrije Universiteit Brussel, Brussels, Belgium.
Dagmara DonohueDepartment of Bioengineering Sciences, Structural Biology Brussels, International Joint Research Group VUB-EPFL BioNanotechnology & NanoMedicine (NANO), Vrije Universiteit Brussel, Brussels, Belgium.
Sandra ClaesDepartment of Microbiology and Immunology, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Hichem SahliDepartment of Electronics and Informatics (ETRO), AVSP Lab, International Joint Research Group VUB-EPFL BioNanotechnology and NanoMedicine (NANO), Vrije Universiteit Brussel, Brussels, Belgium Interuniversity Microelectronics Centre (IMEC), Leuven, Belgium.
Dominique ScholsDepartment of Microbiology and Immunology, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Ronnie G WillaertDepartment of Bioengineering Sciences, Structural Biology Brussels, International Joint Research Group VUB-EPFL BioNanotechnology & NanoMedicine (NANO), Vrije Universiteit Brussel, Brussels, Belgium Ronnie.Willaert@vub.ac.be.
Vrije Universiteit Brussel · BEIMEC · BEKU Leuven · BERega Institute for Medical Research · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledThe first step in the infection of humans by microbial pathogens is their adherence to host tissue cells, which is frequently based on the binding of carbohydrate-binding proteins (lectin-like adhesins) to human cell receptors that expose glycans. In only a few cases have the human receptors of pathogenic adhesins been described. A novel strategy-based on the construction of a lectin-glycan interaction (LGI) network-to identify the potential human binding receptors for pathogenic adhesins with lectin activity was developed. The new approach is based on linking glycan array screening results of these adhesins to a human glycoprotein database via the construction of an LGI network. This strategy was used to detect human receptors for virulent Escherichia coli (FimH adhesin), and the fungal pathogens Candida albicans (Als1p and Als3p adhesins) and C. glabrata (Epa1, Epa6, and Epa7 adhesins), which cause candidiasis. This LGI network strategy allows the profiling of potential adhesin binding receptors in the host with prioritization, based on experimental binding data, of the most relevant interactions. New potential targets for the selected adhesins were predicted and experimentally confirmed. This methodology was also used to predict lectin interactions with envelope glycoproteins of human-pathogenic viruses. It was shown that this strategy was successful in revealing that the FimH adhesin has anti-HIV activity. IMPORTANCE: Microbial pathogens may express a wide range of carbohydrate-specific adhesion proteins that mediate adherence to host tissues. Pathogen attachment to host cells is achieved through the binding of these lectin-like adhesins to glycans on human glycoproteins. In only a few cases have the human receptors of pathogenic adhesins been described. We developed a new strategy to predict these interacting receptors. Therefore, we developed a novel LGI network that would allow the mapping of potential adhesin binding receptors in the host with prioritization, based on the experimental binding data, of the most relevant interactions. New potential targets for the selected adhesins (bacterial uroepithelial FimH from E. coli and fungal Epa and Als adhesins from C. glabrata and C. albicans) were predicted and experimentally confirmed. This methodology was also used to predict lectin interactions with human-pathogenic viruses and to discover whether FimH adhesin has anti-HIV activity.

Indexed as

Adhesins, BacterialCell LineFungal ProteinsHumansLectinsPolysaccharidesProtein BindingReceptors, Cell SurfaceAdhesins, BacterialFungal ProteinsLectinsPolysaccharidesReceptors, Cell Surface

Identifiers

PMID27406561
PMCPMC4958244
OpenAlexW2474986571

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.