Evidence map›Paper›PMID 27405393›Full record

ArticleScientific reports2016

Complete Genome Analysis of an Enterovirus EV-B83 Isolated in China.

Jingjing Tang, Qiongfen Li, Bingjun Tian, Jie Zhang, Kai Li, Zhengrong Ding, Lin Lu

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jingjing TangYunnan Center for Disease Control and Prevention, Kunming, Yunnan Province, People's Republic of China.
Qiongfen LiYunnan Center for Disease Control and Prevention, Kunming, Yunnan Province, People's Republic of China.
Bingjun TianYunnan Center for Disease Control and Prevention, Kunming, Yunnan Province, People's Republic of China.
Jie ZhangYunnan Center for Disease Control and Prevention, Kunming, Yunnan Province, People's Republic of China.
Kai LiYunnan Center for Disease Control and Prevention, Kunming, Yunnan Province, People's Republic of China.
Zhengrong DingYunnan Center for Disease Control and Prevention, Kunming, Yunnan Province, People's Republic of China.
Lin LuYunnan Center for Disease Control and Prevention, Kunming, Yunnan Province, People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enterovirus B83 (EV-B83) is a recently identified member of enterovirus species B. It is a rarely reported serotype and up to date, only the complete genome sequence of the prototype strain from the United States is available. In this study, we describe the complete genomic characterization of an EV-B83 strain 246/YN/CHN/08HC isolated from a healthy child living in border region of Yunnan Province, China in 2008. Compared with the prototype strain, it had 79.6% similarity in the complete genome and 78.9% similarity in the VP1 coding region, reflecting the great genetic divergence among them. VP1-coding region alignment revealed it had 77.2-91.3% with other EV-B83 sequences available in GenBank. Similarity plot analysis revealed it had higher identity with several other EV-B serotypes than the EV-B83 prototype strain in the P2 and P3 coding region, suggesting multiple recombination events might have occurred. The great genetic divergence with previously isolated strains and the extremely rare isolation suggest this serotype has circulated at a low epidemic strength for many years. This is the first report of complete genome of EV-B83 in China.

Indexed as

AnimalsBase SequenceCapsid ProteinsCell LineChildChinaEnterovirus B, HumanEnterovirus InfectionsGenome, ViralHumansMaleMiceMolecular TypingRNA, ViralSequence Analysis, RNACapsid ProteinsRNA, ViralVP1 protein, enterovirus B

Identifiers

PMID27405393
PMCPMC4942604

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.