Evidence map›Paper›PMID 27404994›Full record

ArticleScientific reports2016

Development of a synthetic gene network to modulate gene expression by mechanical forces.

Zoltán Kis, Tania Rodin, Asma Zafar, Zhangxing Lai, Grace Freke, Oliver Fleck, Armando Del Rio Hernandez, Leila Towhidi, Ryan M Pedrigi, Takayuki Homma and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Traceless Regulation of Genetic Circuitry.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 3 countries.

Zoltán KisDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Tania RodinDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Asma ZafarDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Zhangxing LaiDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Grace FrekeDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Oliver FleckDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Armando Del Rio HernandezDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Leila TowhidiDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Ryan M PedrigiDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Takayuki HommaDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Rob KramsDepartment of Bioengineering, Imperial College London, Exhibition Road, London, SW7 2AZ, United Kingdom.
Imperial College London · GB

Funding

British Heart Foundation PG/15/49/31595British Heart Foundation RG/11/13/29055
6 · The paper itself

Abstract

The majority of (mammalian) cells in our body are sensitive to mechanical forces, but little work has been done to develop assays to monitor mechanosensor activity. Furthermore, it is currently impossible to use mechanosensor activity to drive gene expression. To address these needs, we developed the first mammalian mechanosensitive synthetic gene network to monitor endothelial cell shear stress levels and directly modulate expression of an atheroprotective transcription factor by shear stress. The technique is highly modular, easily scalable and allows graded control of gene expression by mechanical stimuli in hard-to-transfect mammalian cells. We call this new approach mechanosyngenetics. To insert the gene network into a high proportion of cells, a hybrid transfection procedure was developed that involves electroporation, plasmids replication in mammalian cells, mammalian antibiotic selection, a second electroporation and gene network activation. This procedure takes 1 week and yielded over 60% of cells with a functional gene network. To test gene network functionality, we developed a flow setup that exposes cells to linearly increasing shear stress along the length of the flow channel floor. Activation of the gene network varied logarithmically as a function of shear stress magnitude.

Indexed as

Gene ExpressionGene Expression RegulationGene Regulatory NetworksMechanotransduction, CellularCells, CulturedCell SurvivalEndothelial CellsHeLa CellsHumansKruppel-Like Transcription FactorsStress, MechanicalTranscriptional ActivationTransfectionKLF2 protein, humanKruppel-Like Transcription Factors

Identifiers

PMID27404994
PMCPMC4940741
OpenAlexW2460096137

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.