Evidence map›Paper›PMID 27403320›Full record

ArticleBMJ open respiratory research2016

A novel flow cytometric-based method to measure kinase inhibition in sputum from COPD subjects.

G C Nicholson, R A Holloway, B R Leaker, I Kilty, M Salganik, L Tan, P J Barnes, L E Donnelly

Open access · goldAbstract read
In one paragraph

Article in BMJ open respiratory research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 92% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

G C NicholsonRespiratory Clinical Trials Ltd , London , UK.
R A HollowayAirways Disease Section , National Heart & Lung Institute, Imperial College , London , UK.
B R LeakerRespiratory Clinical Trials Ltd , London , UK.
I KiltyPfizer , Cambridge, Massachusetts , USA.
M SalganikPfizer , Cambridge, Massachusetts , USA.
L TanPfizer , Cambridge, Massachusetts , USA.
P J BarnesAirways Disease Section , National Heart & Lung Institute, Imperial College , London , UK.
L E DonnellyAirways Disease Section , National Heart & Lung Institute, Imperial College , London , UK.
Imperial College London · GBPfizer (United States) · USRespiratory Clinical Trials · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionJanus kinases (JAKs) regulate inflammatory gene expression through phosphorylation of signal transducer and activator of transcription (STAT) proteins. Expression of STAT proteins is increased in chronic obstructive pulmonary disease (COPD), and may be involved in driving chronic inflammation. Oral JAK inhibitors are effective as anti-inflammatory therapy but exhibit dose-limiting adverse effects. Development of inhaled compounds would be enhanced by robust biomarkers that directly reflect the anti-inflammatory and pharmacological activity in the lung.

methodsA novel flow cytometry assay was developed to measure STAT1 phosphorylation in sputum inflammatory cells. The standard sputum processing method was refined to improve sputum cell viability. The flow cytometric assay was used to assess the reproducibility of the measurement of STAT1 phosphorylation and the in vitro activity of a pan JAK-inhibitor on three separate visits in patients with COPD.

resultsUpregulation of STAT1 phosphorylation was measured following in vitro IFNγ stimulation of sputum macrophages (stimulated/unstimulated ratio 1.57; p<0.00001). Upregulation was inhibited following in vitro preincubation with a pan JAK-inhibitor (inhibited+stimulated/unstimulated ratio 0.97). STAT1 phosphorylation activity could only be measured in macrophages.

conclusionsSputum from patients with COPD can be used to reproducibly measure phospho-STAT expression in sputum macrophages. The flow cytometry-based method can be used to evaluate kinase inhibitors in vitro and subsequently in ex vivo studies. The assay is particularly useful for the assessment of inhaled compounds where whole blood assays may not be relevant.

Indexed as

COPD PharmacologyCytokine BiologyMacrophage Biology

Identifiers

PMID27403320
PMCPMC4932304
OpenAlexW2473949757

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.