Evidence map›Paper›PMID 27403168›Full record

ArticleStem cells international2016

Epigenetic Induction of Definitive and Pancreatic Endoderm Cell Fate in Human Fibroblasts.

Rangarajan Sambathkumar, Eric Kalo, Rob Van Rossom, Marijke M Faas, Paul de Vos, Catherine M Verfaillie

Open access · goldAbstract read
In one paragraph

Article in Stem cells international, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Rangarajan SambathkumarInterdepartmental Stem Cell Institute, Department of Development and Regeneration, Stem Cell Biology and Embryology, KU Leuven, 3000 Leuven, Belgium.ORCID 0000-0002-2751-3143
Eric KaloInterdepartmental Stem Cell Institute, Department of Development and Regeneration, Stem Cell Biology and Embryology, KU Leuven, 3000 Leuven, Belgium.ORCID 0000-0002-6770-3857
Rob Van RossomInterdepartmental Stem Cell Institute, Department of Development and Regeneration, Stem Cell Biology and Embryology, KU Leuven, 3000 Leuven, Belgium.ORCID 0000-0003-1046-5509
Marijke M FaasUniversity Medical Center Groningen (UMCG), Pathology and Medical Biology, Section of Immunoendocrinology, University of Groningen, Hanzeplein 1, EA 11, 9713 GZ Groningen, Netherlands.
Paul de VosUniversity Medical Center Groningen (UMCG), Pathology and Medical Biology, Section of Immunoendocrinology, University of Groningen, Hanzeplein 1, EA 11, 9713 GZ Groningen, Netherlands.
Catherine M VerfaillieInterdepartmental Stem Cell Institute, Department of Development and Regeneration, Stem Cell Biology and Embryology, KU Leuven, 3000 Leuven, Belgium.
Stem Cell Institute · PAUniversity Medical Center Groningen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reprogramming can occur by the introduction of key transcription factors (TFs) as well as by epigenetic changes. We demonstrated that histone deacetylase inhibitor (HDACi) Trichostatin A (TSA) combined with a chromatin remodeling medium (CRM) induced expression of a number of definitive endoderm and early and late pancreatic marker genes. When CRM was omitted, endoderm/pancreatic marker genes were not induced. Furthermore, treatment with DNA methyltransferase inhibitor (DNMTi) 5-azacytidine (5AZA) CRM did not affect gene expression changes, and when 5AZA was combined with TSA, no further increase in gene expression of endoderm, pancreatic endoderm, and endocrine markers was seen over levels induced with TSA alone. Interestingly, TSA-CRM did not affect expression of pluripotency and hepatocyte genes but induced some mesoderm transcripts. Upon removal of TSA-CRM, the endoderm/pancreatic gene expression profile returned to baseline. Our findings underscore the role epigenetic modification in transdifferentiation of one somatic cell into another. However, full reprogramming of fibroblasts to β-cells will require combination of this approach with TF overexpression and/or culture of the partially reprogrammed cells under β-cell specific conditions.

Identifiers

PMID27403168
PMCPMC4925994
OpenAlexW2429945584

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.