Evidence map›Paper›PMID 27402516›Full record

ArticleThe American journal of tropical medicine and hygiene2016

Deployable Molecular Detection of Arboviruses in the Australian Outback.

Timothy J J Inglis, Richard S Bradbury, Russell L McInnes, Stephen P Frances, Adam J Merritt, Avram Levy, Jay Nicholson, Peter J Neville, Michael Lindsay, David W Smith

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of tropical medicine and hygiene, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Timothy J J InglisDivision of Microbiology and Infectious Diseases, PathWest Laboratory Medicine WA, Nedlands, Australia. School of Pathology and Laboratory Medicine, The University of Western Australia, Crawley, Australia. 3rd Health Support Battalion, Adelaide, Australia. tim.inglis@health.wa.gov.au.
Richard S Bradbury3rd Health Support Battalion, Adelaide, Australia. School of Medical and Applied Sciences, Central Queensland University, Rockhampton, Australia.
Russell L McInnesAgilent Technologies Australia, Mulgrave, Australia.
Stephen P FrancesAustralian Army Malaria Institute, Queensland, Australia.
Adam J MerrittDivision of Microbiology and Infectious Diseases, PathWest Laboratory Medicine WA, Nedlands, Australia. School of Pathology and Laboratory Medicine, The University of Western Australia, Crawley, Australia.
Avram LevyDivision of Microbiology and Infectious Diseases, PathWest Laboratory Medicine WA, Nedlands, Australia. School of Pathology and Laboratory Medicine, The University of Western Australia, Crawley, Australia.
Jay Nicholson2nd General Health Battalion, Queensland, Australia.
Peter J Neville2nd General Health Battalion, Queensland, Australia.
Michael Lindsay2nd General Health Battalion, Queensland, Australia.
David W SmithDivision of Microbiology and Infectious Diseases, PathWest Laboratory Medicine WA, Nedlands, Australia. School of Pathology and Laboratory Medicine, The University of Western Australia, Crawley, Australia.
The University of Western Australia · AUQueensland Health · AUAgilent Technologies (Australia) · AUNational Institute of Malaria Research · INSA Health · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The most common causes of human infection from the arboviruses that are endemic in Australia are the arthritogenic alphaviruses: Ross River virus (RRV) and Barmah Forest virus (BFV). The most serious infections are caused by the neurotropic flaviviruses, Murray Valley encephalitis virus (MVEV) and the Kunjin subtype of West Nile virus. The greatest individual risk of arbovirus infection occurs in tropical/subtropical northern Australia because of the warm, wet summer conditions from December to June, where conventional arbovirus surveillance is difficult due to a combination of low population density, large distances between population centers, poor roads, and seasonal flooding. Furthermore, virus detection requires samples to be sent to Perth up to 2,000 km away for definitive analysis, causing delays of days to weeks before test results are available and public health interventions can be started. We deployed a portable molecular biology laboratory for remote field detection of endemic arboviruses in northern Queensland, then in tropical Western Australia and detected BFV, MVEV, and RRV RNA by polymerase chain reaction (PCR) assays of extracts from mosquitoes trapped in Queensland. We then used a field-portable compact real-time thermocycler for the samples collected in the Kimberley region of Western Australia. Real-time field PCR assays enabled concurrent endemic arbovirus distribution mapping in outback Queensland and Western Australia. Our deployable laboratory method provides a concept of operations for future remote area arbovirus surveillance.

Indexed as

ArbovirusesAlphavirusAnimalsCulicidaeEncephalitis Virus, Murray ValleyMosquito VectorsPopulation SurveillanceQueenslandReal-Time Polymerase Chain ReactionRoss River virusWestern AustraliaWest Nile virus

Identifiers

PMID27402516
PMCPMC5014271
OpenAlexW2470716747

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.