Evidence map›Paper›PMID 27400932›Full record

ArticleJournal of neurovirology2016

Biomarkers of chemotaxis and inflammation in cerebrospinal fluid and serum in individuals with HIV-1 subtype C versus B.

Sergio M de Almeida, Indianara Rotta, Yanxin Jiang, Xiao Li, Sonia M Raboni, Clea E Ribeiro, Davey Smith, Michael Potter, Florin Vaida, Scott Letendre and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of neurovirology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Cerebrospinal fluid CD14Journal of neurovirology · 2023
    Article
  5. CD3Journal of neuroimmunology · 2023
    Article
  6. Review
  7. Article
  8. Article
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  10. Review
  11. Article
  12. Observational
  13. Article
  14. Article
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  16. Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Sergio M de AlmeidaUniversidade Federal do Paraná, Curitiba, Paraná, Brazil. sergio.ma@ufpr.br.
Indianara RottaUniversidade Federal do Paraná, Curitiba, Paraná, Brazil.
Yanxin JiangAlzheimer's Therapeutic Research Institute, University of Southern California, San Diego, CA, USA.
Xiao LiChicago Cleaning House, Chicago, IL, USA.
Sonia M RaboniUniversidade Federal do Paraná, Curitiba, Paraná, Brazil.
Clea E RibeiroUniversidade Federal do Paraná, Curitiba, Paraná, Brazil.
Davey SmithDivision of Infectious Diseases, Department of Medicine, University of California, San Diego, CA, USA.
Michael PotterHIV Neurobehavioral Research Center, University of California, San Diego, San Diego, CA, USA.
Florin VaidaDivision of Biostatistics and Bioinformatics, Department of Family Medicine and Public Health, University of California, San Diego, CA, USA.
Scott LetendreChicago Cleaning House, Chicago, IL, USA.
Ronald J EllisHIV Neurobehavioral Research Center, University of California, San Diego, San Diego, CA, USA.
HNRC Group
University of California San Diego · USUniversidade Federal do Paraná · BRUniversity of Southern California · USInstituto de Tecnologia do Paraná · BR

Funding

VirologyP30AI036214 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SUSAN JANET LITTLE · 1994 to 2026
$78.4M
STRUCTURAL NEUROIMAGING COREP30MH062512 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DAVID J MOORE · 2001 to 2026
$50.4M
A Multi-Site Investigation into the Effect of HIV Clade on Neurocognitive ImpairmR01MH083552 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SMITH, DAVID MITCHELL · 2008 to 2012
$3.3M
Midcareer Investigator Award in Patient-Oriented NeuroAIDS ResearchK24MH097673 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LETENDRE, SCOTT L · 2013 to 2017
$917k
HIV Clade on Cognitive and Neurological Disorders BrazilR21MH076651 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ELLIS, RONALD J. · 2006 to 2007
$317k
Milliplex FlexMAP 3DS10RR031646 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LETENDRE, SCOTT L · 2011 to 2011
$153k
NCRR NIH HHS S10 RR031646NIAID NIH HHS P30 AI036214NIMH NIH HHS K24 MH097673NIMH NIH HHS P30 MH062512NIMH NIH HHS R01 MH083552NIMH NIH HHS R21 MH076651
6 · The paper itself

Abstract

A defective chemokine motif in the HIV-1 Tat protein has been hypothesized to alter central nervous system cellular trafficking and inflammation, rendering HIV-1 subtype C less neuropathogenic than B. To evaluate this hypothesis, we compared biomarkers of cellular chemotaxis and inflammation in cerebrospinal fluid (CSF) and serum in individuals infected with HIV-1 subtypes B (n = 27) and C (n = 25) from Curitiba, Brazil. None had opportunistic infections. Chemokines (MCP-1, MIP-1α, MIP-1β, RANTES, IP-10) and cytokines (TNF-α, IFN-γ, IL-1β, IL-2, IL-4, IL-6, IL-7, IL-10) were measured using the multiplex bead suspension array immunoassays or ELISA HD. CSF and serum biomarker concentrations were compared between subtype B and C groups and HIV-positive and HIV-negative subjects (N = 19) using an independent group t test (unadjusted analysis) and linear regression (adjusted analysis), controlling for nadir CD4 and CSF and plasma HIV RNA suppression. CSF levels of cytokines and chemokines were significantly (p < 0.05) elevated in HIV-positive versus HIV-negative participants for 7/13 biomarkers measured, but levels did not differ for subtypes B and C. Serum levels were significantly elevated for 4/13 markers, with no significant differences between subtypes B and C. Although pleocytosis was much more frequent in HIV-positive than in HIV-negative individuals (27 vs. 0 %), subtypes B and C did not differ (32 and 22 %; p = 0.23). We did not find molecular evidence to support the hypothesis that intrathecal chemotaxis and inflammation is less in HIV-1 subtype C than in subtype B. Biomarker changes in CSF were more robust than in serum, suggesting compartmentalization of the immunological response to HIV.

Indexed as

AdultBiomarkersCase-Control StudiesCD4-Positive T-LymphocytesCentral Nervous SystemChemokines, CCChemotaxisFemaleHIV-1HIV InfectionsHumansInterferon-gammaInterleukinsLeukocytosisLinear ModelsMaleBiomarkersChemokines, CCInterferon-gammaInterleukinsRNA, ViralTumor Necrosis Factor-alphaBiomarkersCerebrospinal fluid (CSF)HIV-1HIV-associated neurocognitive disorders (HANDs)InflammatorySubtype

Identifiers

PMID27400932
PMCPMC5130607
OpenAlexW2474612774

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.