Evidence map›Paper›PMID 27400226›Full record

ArticleVector borne and zoonotic diseases (Larchmont, N.Y.)2016

Canine Infections and Partial S Segment Sequence Analysis of Toscana Virus in Turkey.

Ender Dincer, Zeynep Karapinar, Mert Oktem, Merve Ozbaba, Aykut Ozkul, Koray Ergunay

Open access · greenAbstract read
In one paragraph

Article in Vector borne and zoonotic diseases (Larchmont, N.Y.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Current research in parasitology & vector-borne diseases · 2021
    Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Ender Dincer1 Advanced Technology of Education, Research and Application Center, Mersin University , Mersin, Turkey .
Zeynep Karapinar2 Department of Virology, Faculty of Veterinary Medicine, Yuzuncu Yıl University , Van, Turkey .
Mert Oktem3 Department of Biotechnology, Mersin University , Mersin, Turkey .
Merve Ozbaba4 Petical Veterinary Hospital , Mersin, Turkey .
Aykut Ozkul5 Department of Virology, Faculty of Veterinary Medicine, Ankara University , Ankara, Turkey .
Koray Ergunay6 Virology Unit, Department of Medical Microbiology, Faculty of Medicine, Hacettepe University , Ankara, Turkey .
Mersin Üniversitesi · TRAnkara University · TRHacettepe University · TRVan Yüzüncü Yıl Üniversitesi · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionToscana virus (TOSV) is a sandfly-borne bunyavirus with a significant public health impact. Preliminary studies have revealed TOSV exposure in dogs and they were suggested as potential reservoirs. This study was performed to characterize canine TOSV infections in an endemic region. Sequencing of TOSV small (S) segment in several previously identified specimens was also undertaken to reveal viral genealogy. MATERIALS AND

methodsCanine and feline plasma were collected in several districts of Mersin province, Mediterranean Anatolia, Turkey, during May-September, 2015. Phlebovirus RNA was screened through two nested polymerase chain reaction (PCR) assays, targeting S and large (L) segments of the viral genome. A kinetoplast minicircle nested PCR was employed for Leishmania DNA detection and typing. Previously collected TOSV-positive specimens from humans, dogs, cats, and sandflies from various regions in Turkey and Cyprus were further evaluated through the S segment PCR. All amplicons were characterized through sequencing.

resultsA total of 210 specimens that comprise canine (76.2%) and feline (23.8%) plasma were screened. In three (1.9%) and two (1.3%) canine specimens, TOSV and Leishmania nucleic acids were detected, respectively. The TOSV strains were characterized as genotype B, and Leishmania infantum was identified in positive specimens. Twenty-four partial S segment sequences were amplified, which demonstrated a maximum intramural diversity of 3.88% in the nucleotide level. Sequence comparisons revealed significant similarities to particular genotype B strains characterized in Spain and France, whereas a notable divergence was observed among several TOSV strains. Single or recurrent amino acid substitutions were noted in eight residues of the viral nucleocapsid. DISCUSSION: Canine infections of TOSV genotype B, with temporal and spatial association with L. infantum, were detected. Divergent TOSV S segment sequences with amino acid substitutions, presumably associated with host adaptation, were observed.

Indexed as

AnimalsBunyaviridae InfectionsCat DiseasesCatsCoinfectionDisease ReservoirsDog DiseasesDogsGenome, ViralHumansLeishmania infantumLeishmaniasis, VisceralPolymerase Chain ReactionPsychodidaeRNA, ViralSandfly fever Naples virusRNA, ViralArbovirus(es)bunyavirusescaninedogsLeishmaniaPhebovirussandfly (flies)Toscana virusTurkey

Identifiers

PMID27400226
PMCPMC5011618
OpenAlexW2480235020

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.