Evidence map›Paper›PMID 27399916›Full record

ArticleJournal of proteome research2016

Integrated Omic Analysis of a Guinea Pig Model of Heart Failure and Sudden Cardiac Death.

D Brian Foster, Ting Liu, Kai Kammers, Robert O'Meally, Ni Yang, Kyriakos N Papanicolaou, C Conover Talbot, Robert N Cole, Brian O'Rourke

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Retinoic acid in health and disease.Signal transduction and targeted therapy · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Retinoic acid signaling and metabolism in heart failure.American journal of physiology. Heart and circulatory physiology · 2025
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Valsartan nano-filaments alter mitochondrial energetics and promote faster healing in diabetic rat wounds.Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society · 2021
    Article
  17. T-tubule remodeling in human hypertrophic cardiomyopathy.Journal of muscle research and cell motility · 2021
    Review
  18. Article
  19. Mitochondrial CaJournal of molecular and cellular cardiology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

D Brian FosterDivision of Cardiology, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
Ting LiuDivision of Cardiology, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
Kai KammersDepartment of Biostatistics, Johns Hopkins Bloomberg School of Public Health , Baltimore, Maryland 21205, United States.
Robert O'MeallyProteomics Core Facility, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
Ni YangDivision of Cardiology, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
Kyriakos N PapanicolaouDivision of Cardiology, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
C Conover TalbotInstitute for Basic Biomedical Sciences, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
Robert N ColeProteomics Core Facility, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
Brian O'RourkeDivision of Cardiology, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
Johns Hopkins University · USJohns Hopkins Medicine · US

Funding

ENERGETIC REGULATION OF CARDIAC ION CHANNELSR37HL054598 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI O'ROURKE, BRIAN · 2005 to 2014
$3.7M
Redox Modification of the Arrhythmic Substrate in Heart FailureR01HL105216 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI O'ROURKE, BRIAN, TRAYANOVA, NATALIA A. · 2011 to 2014
$3.0M
MItochondrial Dysfunction in Cardiac Hypertrophy and FailureR01HL101235 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI BERS, DONALD M, BLATTER, LOTHAR A · 2010 to 2013
$2.8M
A Systems Biology Approach To Cardiomyopathy in the D. Melanogaster Model SystemR21HL108052 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI FOSTER, D BRIAN, O'ROURKE, BRIAN · 2012 to 2013
$457k
NHLBI NIH HHS HHSN268201000032CNHLBI NIH HHS R01 HL101235NHLBI NIH HHS R21 HL108052NHLBI NIH HHS R37 HL054598
6 · The paper itself

Abstract

Here, we examine key regulatory pathways underlying the transition from compensated hypertrophy (HYP) to decompensated heart failure (HF) and sudden cardiac death (SCD) in a guinea pig pressure-overload model by integrated multiome analysis. Relative protein abundances from sham-operated HYP and HF hearts were assessed by iTRAQ LC-MS/MS. Metabolites were quantified by LC-MS/MS or GC-MS. Transcriptome profiles were obtained using mRNA microarrays. The guinea pig HF proteome exhibited classic biosignatures of cardiac HYP, left ventricular dysfunction, fibrosis, inflammation, and extravasation. Fatty acid metabolism, mitochondrial transcription/translation factors, antioxidant enzymes, and other mitochondrial procsses, were downregulated in HF but not HYP. Proteins upregulated in HF implicate extracellular matrix remodeling, cytoskeletal remodeling, and acute phase inflammation markers. Among metabolites, acylcarnitines were downregulated in HYP and fatty acids accumulated in HF. The correlation of transcript and protein changes in HF was weak (R(2) = 0.23), suggesting post-transcriptional gene regulation in HF. Proteome/metabolome integration indicated metabolic bottlenecks in fatty acyl-CoA processing by carnitine palmitoyl transferase (CPT1B) as well as TCA cycle inhibition. On the basis of these findings, we present a model of cardiac decompensation involving impaired nuclear integration of Ca(2+) and cyclic nucleotide signals that are coupled to mitochondrial metabolic and antioxidant defects through the CREB/PGC1α transcriptional axis.

Indexed as

Death, Sudden, CardiacAnimalsCardiomegalyCitric Acid CycleDisease Models, AnimalDisease ProgressionFatty AcidsGuinea PigsHeart FailureHypertensionLipid MetabolismMetabolomeMetabolomicsProteomicsTranscriptomeFatty Acidsheart failurehypertrophymass spectrometrymedian sweepmetabolic bottleneckmetabolomepathway analysisproteomeproteomicstranscriptome

Identifiers

PMID27399916
PMCPMC5779628
OpenAlexW2467553857

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.