Evidence map›Paper›PMID 27394727›Full record

ArticleMolecular biotechnology2016

Codon Optimization of the "Bos Taurus Chymosin" Gene for the Production of Recombinant Chymosin in Pichia pastoris.

Jose Alberto Espinoza-Molina, Carlos Horacio Acosta-Muñiz, D R Sepulveda, Paul Baruk Zamudio-Flores, Claudio Rios-Velasco

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Article in Molecular biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Boosting Recombinant Bovine Chymosin inFoods (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jose Alberto Espinoza-MolinaCentro de Investigación en Alimentación y Desarrollo, A.C., Av. Rio Conchos s/n, parque industrial, Z.C., 31570, Cd. Cuauhtémoc, Chihuahua, Mexico.
Carlos Horacio Acosta-MuñizCentro de Investigación en Alimentación y Desarrollo, A.C., Av. Rio Conchos s/n, parque industrial, Z.C., 31570, Cd. Cuauhtémoc, Chihuahua, Mexico. cacosta@ciad.mx.
D R SepulvedaCentro de Investigación en Alimentación y Desarrollo, A.C., Av. Rio Conchos s/n, parque industrial, Z.C., 31570, Cd. Cuauhtémoc, Chihuahua, Mexico.
Paul Baruk Zamudio-FloresCentro de Investigación en Alimentación y Desarrollo, A.C., Av. Rio Conchos s/n, parque industrial, Z.C., 31570, Cd. Cuauhtémoc, Chihuahua, Mexico.
Claudio Rios-VelascoCentro de Investigación en Alimentación y Desarrollo, A.C., Av. Rio Conchos s/n, parque industrial, Z.C., 31570, Cd. Cuauhtémoc, Chihuahua, Mexico.
Centro de Investigación en Alimentación y Desarrollo · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Codon optimization of the Bos taurus Chymosin gene (CYM) for its expression in Pichia pastoris was performed in this study. A synthetic CYM gene was designed in silico by replacing codons rarely used by P. pastoris with equivalent nucleotide combinations that codify for the same amino acid but that are more frequently encountered in the genome of P. pastoris. A total of 332 nucleotides were modified to optimize 289 codons. The synthetic CYM gene was cloned into the expression vector pPICZαA and transformed into P. pastoris. The transformed strains were grown in artificial media supplemented with glycerol as a carbon source to increase biomass and then cultured in a similar medium replacing glycerol with methanol as a carbon source to initiate gene induction. Raw extracts of the growth media exhibited milk-clotting activity of 146.11 SU/mL. Produced recombinant chymosin showed coagulant activity from 25 to 50 °C, and within a pH range of 5-6.9, having optimum activity at 35-40 °C, and pH 5.0. These results show that codon optimization is a viable strategy to improve CYM gene expression levels in P. pastoris for the production of recombinant chymosin.

Indexed as

AnimalsCattleChymosinCodonCulture MediaGenes, SyntheticPichiaRecombinant ProteinsSequence Analysis, DNATransformation, GeneticChymosinCodonCulture MediaRecombinant ProteinsChymosinCodon optimizationPichia pastorisProchymosinRecombinant protein

Identifiers

PMID27394727
OpenAlexW2460900457

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.